SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000011482 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000011482
Domain Number 1 Region: 76-288,316-363
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.04e-29
Family WD40-repeat 0.0084
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000011482   Gene: ENSDORG00000012212   Transcript: ENSDORT00000012211
Sequence length 454
Comment pep:known_by_projection genescaffold:dipOrd1:GeneScaffold_4313:13990:52867:1 gene:ENSDORG00000012212 transcript:ENSDORT00000012211 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNLASQSGEAGAGQLLFANFNQDNTREKKRARASGRRHRDYAXXXXXXXXXXXXXXXLSS
VDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTIL
AVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSAT
IGEVQVFDTINLRAANMIPAHDSPLAALAFDASGSKLATASEKGTVIRVFSIPEGQKLFE
FRRGVKXXXXICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLM
ASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGASDGYLYMYNLD
PQEGGECALMRQHRLDGSMETTSEIVDSASHDCPLVTQTYSTAAAKGAYTPSSPTRLAYT
DDLGAVGGTCLEEEASALRLDEDSEHPPMILRTD
Download sequence
Identical sequences ENSDORP00000011482 ENSDORP00000011482

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]