SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000013685 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000013685
Domain Number 1 Region: 56-218
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 6.18e-22
Family Canonical RBD 0.0069
Further Details:      
 
Weak hits

Sequence:  ENSDORP00000013685
Domain Number - Region: 254-299
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 0.000808
Family Double-stranded RNA-binding domain (dsRBD) 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000013685   Gene: ENSDORG00000014552   Transcript: ENSDORT00000014552
Sequence length 353
Comment pep:known_by_projection genescaffold:dipOrd1:GeneScaffold_2226:6391:8417:-1 gene:ENSDORG00000014552 transcript:ENSDORT00000014552 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQSKRECEQWCERVNPENKAALEAWVRETGIRLVQVNGQRKYGGPPPGWVGSPPPAGSEV
FIGRLPQDVYEHQLIPLFQRVGRLYEFRLMMTFSGLNRGFAYARYSSRRGAQAAIATLHN
HLLRPSCPLLVCRSTEKCELSVDGLPSSVTRRALLLALQPLGPGLQEALLLPSPGSTATQ
IALLKFSSHRAAAMAKKALVEGQSRLCGEPVTVEWLKPDLKQLLRPQLMSPSLQRLQPNS
SQLALAKNKLGSQGPRAALQMLCQRMKLGSPVFLTKCLDTGPAGWHRFWYQVVIPGHPVP
FSGLIWVVLTPDGQDGHEVAKDAVSTQLLEALSESEASFLWSGGAEAGTILKQ
Download sequence
Identical sequences A0A1S3FH52
ENSDORP00000013685 ENSDORP00000013685 XP_012875928.1.60039

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]