SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000014095 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000014095
Domain Number 1 Region: 65-179
Classification Level Classification E-value
Superfamily DNA-binding domain 6.54e-33
Family Methyl-CpG-binding domain, MBD 0.000000724
Further Details:      
 
Weak hits

Sequence:  ENSDORP00000014095
Domain Number - Region: 191-239
Classification Level Classification E-value
Superfamily E set domains 0.0127
Family Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000014095   Gene: ENSDORG00000014978   Transcript: ENSDORT00000014977
Sequence length 479
Comment pep:known_by_projection scaffold:dipOrd1:scaffold_12425:5551:8020:-1 gene:ENSDORG00000014978 transcript:ENSDORT00000014977 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EEKSEDQDLQGLKDRPLKFKKVKKDKKEDKEGNKHEPLQPSAHHSAEPAEAGKAETSEES
GSAPAVPEASASPKQRRSIIRDRGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQ
GKAFRSKVELIAYFEKVGDTSLDPNDFDFTVTGRGSPSRREQKPPKKPKSPKAPGTGRGR
GRPKGSGTGRPKTAASEGVQVKRVLEKSPGKLLVKMPFQPSPGGKGEGGGATTSAQVMVI
KRPGRKRKAEADPQAIPKKRGRKPGSVVAAAAAEAKKKAVKESSIRSVQETVLPIKKRKT
RETVSIEVKEVVKPLLVSTLGEKSGKGLKTCKSPGRKSKESSPKGRSSASASSPPKKEHH
HHHHHSESPKAPTPLLPLPPPPLPEPESSEDPTSPPEPQDLSSSVCKEEKMSRGGSLESD
GCPKEPAKTQPAVATAATAAEKYKHRGEGERKDIVSSSMPRPNREEPVDSRTPVTERVS
Download sequence
Identical sequences ENSDORP00000014095 ENSDORP00000014095

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]