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Domain assignment for jgi|MicpuC3|62866|MicpuC2.est_orfs.10_1849_4269375:2 from Micromonas pusilla CCMP1545 v3.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|MicpuC3|62866|MicpuC2.est_orfs.10_1849_4269375:2
Domain Number 1 Region: 183-305
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.48e-29
Family Single strand DNA-binding domain, SSB 0.00014
Further Details:      
 
Domain Number 2 Region: 62-178
Classification Level Classification E-value
Superfamily BRCA2 helical domain 0.000000000000106
Family BRCA2 helical domain 0.0014
Further Details:      
 
Domain Number 3 Region: 309-337,421-497
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0000000000137
Family Single strand DNA-binding domain, SSB 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|MicpuC3|62866|MicpuC2.est_orfs.10_1849_4269375:2
Sequence length 780
Sequence
MLGNGARPAVARGKTPSALGIGTKRVVADGGTNATAEPPAAKRSNLGNLGAPSVHDLFAS
RRDRAPLSTYFHGLKPMQRPSRSLDAAARAMTADTAIGYRVSSDDGATLTTADFRREMLD
AGCKAHLLSKEYVSNACRWVVWQQACVARAFPEHLGARGALSKRAVTQRLLYRYERELIR
ARRPWIRRVMERDTPAGTPAVLVIAAVRRLGGAGGGGGGGGGGAEIEVTDGWYGLAARLD
PALSDLLRRGKLHVGQKILVQGAELRGSAEPASPLTDAADELWLALHRNGARPAPWDATL
GARRAAATFPLRTIVPNGGNVLRTLVHVERAYPPAWVESGRVDGRTIHRGDAAEARAARA
FEAARAEVIERAANDVVLGNGSRYRDDLCDLTDADARREDHEEAVNKTLESKGLLERRVR
RCVKLRVSGVRNVEHREARLVGSALLTTYDVDESFLSHVVEGACYELTGDLRPSAFEKAG
LELAAGRKTRWRRVSEDALARAGLAPSPTPRKLGGVNDIAAGAVRRGDEFDAVAVLLHAS
NPMPPDAPRSQWAFALDHTSADGARLLAIEIESRTTEAFASAFEWGAGGGGDKNVHHATV
LKFENLTYARRDDENALEVARATEHTRVTVLLPSGSASASAPSSSSSSSSSAAAARDVLA
KRLSDGVLDVRALSRRVRALTNAPSPAGKTDPPPPPPPSSSSRSPAAATGRYSIASEMEW
SQGFMNAVEAAEAKAAEELERRRTMKEAEDAADAEAEAEAEAAFARAKGGTLTLESEPQA
Download sequence
Identical sequences C1N0K9
XP_003061659.1.6386 jgi|MicpuC3|62866|MicpuC2.est_orfs.10_1849_4269375:2

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