SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|188584851|ref|YP_001916396.1| from Natranaerobius thermophilus JW/NM-WN-LF

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|188584851|ref|YP_001916396.1|
Domain Number 1 Region: 83-177
Classification Level Classification E-value
Superfamily Ribosomal protein L6 6.62e-37
Family Ribosomal protein L6 0.0000266
Further Details:      
 
Domain Number 2 Region: 1-82
Classification Level Classification E-value
Superfamily Ribosomal protein L6 9.83e-26
Family Ribosomal protein L6 0.00016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|188584851|ref|YP_001916396.1|
Sequence length 178
Comment 50S ribosomal protein L6 [Natranaerobius thermophilus JW/NM-WN-LF]
Sequence
MSRIGKKPIEIPDSVDISINNNEVTVKGPKGELSQVVDQSIILEEEEGQLLVKRPTDSNH
HKSLHGLSRSLIANMVEGVTNGFERHLEIVGVGYRAQMQGKNLVLNVGYSHPVTIEPPEG
VEIEVPKNNQIIVKGTDKEVVGQVAARIRAVRKPEPYKGKGIKYAEEQIIRKVGKTGK
Download sequence
Identical sequences B2A4F4
457570.Nther_0209 gi|188584851|ref|YP_001916396.1| WP_012446697.1.10671

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]