SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|325284680|ref|YP_004264143.1| from Deinococcus proteolyticus MRP

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|325284680|ref|YP_004264143.1|
Domain Number 1 Region: 318-887
Classification Level Classification E-value
Superfamily Formate dehydrogenase/DMSO reductase, domains 1-3 7.59e-184
Family Formate dehydrogenase/DMSO reductase, domains 1-3 0.0000000025
Further Details:      
 
Domain Number 2 Region: 849-997
Classification Level Classification E-value
Superfamily ADC-like 1.24e-39
Family Formate dehydrogenase/DMSO reductase, C-terminal domain 0.00091
Further Details:      
 
Domain Number 3 Region: 136-272
Classification Level Classification E-value
Superfamily 4Fe-4S ferredoxins 7.11e-28
Family Ferredoxin domains from multidomain proteins 0.038
Further Details:      
 
Domain Number 4 Region: 65-135
Classification Level Classification E-value
Superfamily 2Fe-2S ferredoxin-like 0.00000000000652
Family 2Fe-2S ferredoxin domains from multidomain proteins 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|325284680|ref|YP_004264143.1|
Sequence length 1060
Comment formate dehydrogenase, alpha subunit [Deinococcus proteolyticus MRP]
Sequence
MKGDPAVTQSNDPGFPHDPGTQHSGTQHSGAGTDNVSTNNIGPKEPTAELLFPPGPLHPK
SGEWVEVSIDGVAYPAQLGEPLLDVINRSGTELAQVCYHPQLGPIQSCDTCTVEIDGQLT
RACGTPVQAGQVVRTQTEAARSVQRDAYDRLIANHVLYCTVCDNNNGNCAVHNTLSTLRL
EHQHRPYHPKGYEKDFSNPFYRYDPDQCILCGRCVEACQNVQVNETLSINWEAEQPRVLW
DGGKPIGESSCVSCGHCITVCPCNALMEKSMLGEAGLMTDLPLPVFNSAVEAVKAVEPST
GLEAILGISEVESQAREGYIERTKTVCTYCGVGCSFDVWTKGRHILKVEPQQGAANGIST
CVKGKFGWDYVNSEDRLTSPLIREGDRFREASWDEALDYVARRLTEIKGQYGPDALSFIA
SSKCTNEEAFLVQKFARQVIGTNNVDNCSRYCQSPATVGLVRTVGYGGDSGTIKDLEQAD
LVIGVGTNTAESHPVLATRLKRAQKLGRQKIVVVDLREHELARRADLFLQPRPATDFIWL
NAVSRYILDHGLEAREFLAERVDGLAEFRASLEPYTLEYAAEATGWSVETLVNLAEMIAS
HKRVCIMWAMGVTQQCGGSETSTAISNLLLVTGNYGRPGTGAYPLRGHNNVQGTSDMGAM
PDQVSGYQRVTDPEVVARIQAEWGITLRPDRGLDNTQMIDAAIDGRLKAMWLTGEEMSLT
DADVNHLIRGYESLELFVVQDLYFTNTARYADVIFPAAPSLEKEGTFTSTERRIQRLYQV
MEPLPGCKPDWQIYQAVAQRMGAEGWNYTHPGDIMDEVARVSPMFAGVHYSRLEGYDTLC
WPVAEDGTDSPLLYTEEFHFEGGKARLWPAEYVAPVNVPDAEYDLQLNSGRMLEHFHEGN
MTFRVAGIAAKTPDAFVEVSPELAAERGVETGSWVRVVSKNGAVRLRALVTERVTGKQIY
IPMNSRELEGSVNLLTGQNRDTITHTPAYKDTAVRLEVLGERGASPLPRHNFRFGHPTPQ
RGVEVERKWARDDYFFPDGSYVGGIAEESHGEAAAFGSDD
Download sequence
Identical sequences F0RPH7
gi|325284680|ref|YP_004264143.1|NC_015169 gi|325284680|ref|YP_004264143.1| WP_013623015.1.93574

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]