SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|319900151|ref|YP_004159879.1| from Bacteroides helcogenes P 36-108

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|319900151|ref|YP_004159879.1|
Domain Number 1 Region: 143-213
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0000982
Family Cold shock DNA-binding domain-like 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|319900151|ref|YP_004159879.1|
Sequence length 278
Comment hypothetical protein Bache_0263 [Bacteroides helcogenes P 36-108]
Sequence
MSIELGKYNTLTVVKEVDFGMYLDGGEEGEILLPSRYVPKDCKVGDELNVFIYLDNEERL
VATTLTPLVQVGQFAYLEVAWINQYGAFLNWGLMKDLFVPFREQKMKMQVGKSYVIHAHL
DDESYRIVASAKVDRYLSKEKASYEPGQEVDVLIWQKTDLGFKVIIENLYGGLLYDSEIF
QPLHTGMVLKAYVKQVREDGKIDLELQKAGPAKVNDFSSVLLDYIRRQGGRITLNDKSPA
EDIYAVFGVSKKTFKKAVGDLYKKRLLILDENGIEIRN
Download sequence
Identical sequences E6STU0
gi|319900151|ref|YP_004159879.1| WP_013545910.1.62754

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]