SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|383484466|ref|YP_005393379.1| from Rickettsia parkeri str. Portsmouth

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|383484466|ref|YP_005393379.1|
Domain Number 1 Region: 41-366
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.15e-26
Family L-arabinose binding protein-like 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|383484466|ref|YP_005393379.1|
Sequence length 372
Comment ABC transporter substrate-binding protein [Rickettsia parkeri str. Portsmouth]
Sequence
MASIKHKLRIVLSFFCLIYLTSCQTPKEEPISFPKKEQTEIEIAILMPNQGPDSIVGKQY
KDLIKMGLNDGIKSYIHVTSYDGSDEKNVLAAMDKIVARKTKIILGPLYSNFTSLIAEKA
KANDIIIITMSNNPALAEDKLFVFGHAPLKQLIRIINYYASNNHKDFMALLPKGKHSQTI
SQVMQNILIQNNASLSRTEFYEDNPESIAKAARNISDNTDIINEHSDTTKPVIYLSDDPK
NLNLLADSIRKYNLDKKAILIGDHRIDIDYPENIDISFTGSLNLLNSNVPDRAKDLGINH
IGFMHLLSYDLGRMTANYIGNEFASERFLNRMNSRQPYIGLSGNIYFIDGVAQRRYDIIR
KENGIYSTVSGN
Download sequence
Identical sequences A0A0F3QMY5
WP_014411043.1.24793 WP_014411043.1.3533 WP_014411043.1.42246 WP_014411043.1.49683 gi|383484466|ref|YP_005393379.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]