SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|328955700|ref|YP_004373033.1| from Coriobacterium glomerans PW2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|328955700|ref|YP_004373033.1|
Domain Number 1 Region: 6-93
Classification Level Classification E-value
Superfamily PTS system IIB component-like 8.02e-31
Family PTS system, Fructose specific IIB subunit-like 0.00026
Further Details:      
 
Domain Number 2 Region: 585-728
Classification Level Classification E-value
Superfamily Phoshotransferase/anion transport protein 6.15e-30
Family IIA domain of mannitol-specific and ntr phosphotransferase EII 0.00072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|328955700|ref|YP_004373033.1|
Sequence length 731
Comment PTS system D-fructose-specific transporter subunit IIBCA [Coriobacterium glomerans PW2]
Sequence
MSDTFDIVAATGCPTGIAHTYMAKEALERAAEARGLSIKVETHGQVGVEDELTAAEIAGA
RAVVIAADKDVDADRFAGRPQVSVSVSKALSAEAAGVLIDRALAAEGTRAQADRAAAEGA
PRASREHETIVHQLYRHLMNGVSHMLVFVVAGGVLTAMSFLWGITSYDSTAADYSAFAAM
LKTIGGIAMNLMVPVLSAYIAESIGDRPALVPGFVAGMIAIQGLPVNATTGLIDAGGTGV
GFGFLGGIVGGFLAGYVIVALEHLLRRLPQSLGGLKAIFLYPLFSTLIVGIVMLAISVPM
AWINTSMMSFLQSLRSSGPIVLGLAIGCMCAFDMGGPVNKAAYATGTFLLGSALEAGVGT
RAYDFGTNFMAAVSAACIVPPLITAFAVIVGRRWFSREDHDAGVVNLILGSTHITEGAIP
FMTKNIWPVMPIMMIGSSIASILTIMFNVHDPAPHGGFLVIPVVEGWQLWVASILAGTVV
GGLLFVGFKRADHLRREHGDMINGGVAPRSATVSPAGSLACKESDAGAQTSAVDARAVAS
SGDPSAAGPQAGDPQGAPSDDGKMQRGFGTGSVTQGGSEASKGFVCPEDIFVDVDFSTRD
EVIDFLSREAVSRGHADDASALAAAFLEREAEGSTGMMDGFAIPHAKAATVRDAAVMIVK
DPSGIDGWDTMDDKPINIAIALLIPDSEAGSTHLRLLSRVAEALMDEDLRQDLRKARSRE
AIAQIVNERLS
Download sequence
Identical sequences F2N835
WP_013708961.1.79872 gi|328955700|ref|YP_004373033.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]