SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|332796456|ref|YP_004457956.1| from Acidianus hospitalis W1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|332796456|ref|YP_004457956.1|
Domain Number 1 Region: 67-302
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.94e-56
Family RecA protein-like (ATPase-domain) 0.000000168
Further Details:      
 
Domain Number 2 Region: 1-51
Classification Level Classification E-value
Superfamily Rad51 N-terminal domain-like 0.0000000113
Family DNA repair protein Rad51, N-terminal domain 0.008
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|332796456|ref|YP_004457956.1|
Sequence length 305
Comment DNA repair and recombination protein RadA [Acidianus hospitalis W1]
Sequence
MGQAVLNKLIDAGYSSLEAIAVASPQDLSVAAGIPLTTAQRIIKEARDALDIRFKTALEV
KKERMNVRKITTSSQALDGLLGGGIETRTMTEFFGEFGSGKTQICHQISVNVQLPPEKGG
LSGKAVYIDTEGTFRWERIEAMAKAAGLDPDTAMDNIYYMRAINSDHQIAIGDDLQEFIA
KNPSVKVVIVDSVTSHFRAEYTGRENLAARQQKLNKHLHQLTRLAEIYDLAVIITNQVMA
RPDMFYGDPTVAVGGHTLYHVPGIRVQLKKSRGNKRIARIVDAPHLPEGEIVFAITEEGI
RDAEE
Download sequence
Identical sequences F4B7Y1
gi|332796456|ref|YP_004457956.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]