SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|332797810|ref|YP_004459310.1| from Acidianus hospitalis W1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|332797810|ref|YP_004459310.1|
Domain Number 1 Region: 125-259
Classification Level Classification E-value
Superfamily Translational machinery components 2.75e-39
Family ERF1/Dom34 middle domain-like 0.0013
Further Details:      
 
Domain Number 2 Region: 2-123
Classification Level Classification E-value
Superfamily N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 2.35e-37
Family N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 0.00068
Further Details:      
 
Domain Number 3 Region: 260-353
Classification Level Classification E-value
Superfamily L30e-like 8.48e-21
Family ERF1/Dom34 C-terminal domain-like 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|332797810|ref|YP_004459310.1|
Sequence length 354
Comment eRF1 domain 2 protein [Acidianus hospitalis W1]
Sequence
MKVLLKELKKWSAPATVLLSLYIPPGRPIADVLNNLRQEASISQNIKLKRTRDAVESAIS
AAIDRLTSIPKVPDNGLVLFCGENFETEEFKCYMFSPPEKVTVYFYRTDKFFHLEFLEDM
VEENEVYGLIIVERDTATIGILRGTRIEELEEIEGYVPGKHMMGGQSQRRIDRIIEELYH
DFLKEVGEKVNSYFLPYLEEKKLKGILVGGPGYAKNDFYEGDYMEYRLKKLVLEPLIDVG
DQGEAGLREMVMKAKDLLKNQKYVEVENLLDEIKYHLAKDDGLVVYGKEEIKKAMDMGAL
DALIVHEDNEEDSLTKEAEKFGTKVYVINDEVPEAEWIKKTFGGSIGKLRFRIE
Download sequence
Identical sequences F4B8Y9
WP_013776927.1.74519 gi|332797810|ref|YP_004459310.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]