SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for Thhalv10028783m|PACid:20197484 from Thellungiella halophila v173

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Thhalv10028783m|PACid:20197484
Domain Number 1 Region: 30-117
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.79e-30
Family B3 DNA binding domain 0.0000302
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Thhalv10028783m|PACid:20197484
Sequence length 341
Sequence
MSNSDQELAEIGANGSGNNNNNFNLAFREHMFDKVLTPSDVGKLNRLVIPKQHAENYFPL
ANNQNGTVLDFEDRNGKTWRFRYSYWNSSQSYVMTKGWSRFVKDKNLENGDAVSFHRAYV
PDDNEPENRRKLLFIDWRHRADTNLVHNITHPIFGSPTYPTASYFPVTEYSMSRYRSFPP
LYHNRFQEREVLEYGYGRVVNGGRYYAGTPLDHHHHQWNLGRSEPSLVYDSHPVYPASRV
TSSSSSAMLPPFTPSQPPPPEGTVKKVRLFGVDVEESSSSGETRGEMGVVAGYSSSSPVV
IRDDDESTWRSPRGEMGASSSSVLQLSDDEDYKRKGKSLQL
Download sequence
Identical sequences V4LDE5
XP_006396350.1.70970 Thhalv10028783m|PACid:20197484

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]