SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for jgi|Araly1|497432|fgenesh2_kg.457__2__AT2G35310.1 from Arabidopsis lyrata

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Araly1|497432|fgenesh2_kg.457__2__AT2G35310.1
Domain Number 1 Region: 15-119
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.12e-20
Family B3 DNA binding domain 0.0039
Further Details:      
 
Domain Number 2 Region: 193-287
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.96e-16
Family B3 DNA binding domain 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Araly1|497432|fgenesh2_kg.457__2__AT2G35310.1
Sequence length 290
Sequence
MARNSDYDMCKEERKRESFFKVLQRVDFSSENLRALPYDFVRSFSNNELSGKMKIKAQWG
SSWEVEICKNPRFYFMEKSGWVKFVRDNALGDNEFLTFTHKGTMRFTVNIFKQDGKEMLQ
PPQSMASMASSRRRRTKTEQGISYLATTITAESNGGENYTRKLNFEKKKAAESQNSKRTE
KVFSVRRDSAGASSSSVAEFTIFIKKSYLIFMRIPKSVQSIHMPMQRTIFKIHQPNMKKS
WNVVYLVANRGASFSGGWKRLAQEYPVAVGDTCKFSFIKQHELILFVSKP
Download sequence
Identical sequences D7MXL5
XP_002862460.1.15461 59689.fgenesh2_kg.457__2__AT2G35310.1 jgi|Araly1|497432|fgenesh2_kg.457__2__AT2G35310.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]