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Domain assignment for jgi|Araly1|904120|scaffold_403621.1 from Arabidopsis lyrata

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Araly1|904120|scaffold_403621.1
Domain Number 1 Region: 109-253
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.03e-38
Family B3 DNA binding domain 0.0042
Further Details:      
 
Domain Number 2 Region: 484-565
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000000000275
Family PB1 domain 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Araly1|904120|scaffold_403621.1
Sequence length 600
Sequence
MANVDADFRTSRSNDDQLYSELWKACAGPLVEVPRSNERVFYFPQGHMEQLVASTNQGVV
DQEIPVFNLPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPT
VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF
RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAKQQSTMPASVISSQ
SMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMVAMKNGFSLGMRFRMRFEGEE
SPERIFTGTIVGSGDLSSQWPASKWRSLQIQWDEPSSIPRPNKVSPWEIEPFSPSALTPT
PTQQQSKSKRSRPIEITGSPAASNFLSSFPQSHESNPSVKLLFHDIATERNSNKSVFSSG
LQCKKTEAPVTSCCRLFGFDLTSKPASAPIPCNKQLISVDSNISDSTPKCQDPNSSNSPK
EQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWTIVF
TDDEGDMMLVGDDPWNEFCKMAKKLFIYPSDEVKKLSSKSLLPDEGTIVYLESDQRTVHV
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Identical sequences D7LEK5
59689.scaffold_403621.1 XP_002880250.1.15461 jgi|Araly1|904120|scaffold_403621.1

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