SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|313125521|ref|YP_004035785.1| from Halogeometricum borinquense DSM 11551

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|313125521|ref|YP_004035785.1|
Domain Number 1 Region: 1-150
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.5e-30
Family GHMP Kinase, N-terminal domain 0.0000695
Further Details:      
 
Domain Number 2 Region: 154-287
Classification Level Classification E-value
Superfamily GHMP Kinase, C-terminal domain 1.22e-24
Family Homoserine kinase 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|313125521|ref|YP_004035785.1|
Sequence length 291
Comment homoserine kinase [Halogeometricum borinquense DSM 11551]
Sequence
MRTVRAPATSANLGSGFDVFGVALDRPADVIRVEKASRTTIEVTGVGSQYIPEDPEKNVV
GAVAEALDAPAHIQIDKGVRPSSGLGSSAASAAGAALALNALYDRGYSRSELVPAAAEGE
AVVSGEAHVDNVAPALLGGFTVAREDEVTTVDTDISLVACLPEIAISTRDARRVVPTRAD
MEDVVHTVGSAATLAVGMCRSDPELVGRGMDERLVTPARSELITGYENVRTAALDAGATG
VTVSGAGPSVLAACYPDDRRQVAAAMVDGFDDAGVEARAYQTRVGGGAVVF
Download sequence
Identical sequences E4NNJ2
gi|313125521|ref|YP_004035785.1| WP_006055085.1.71935 WP_006055085.1.94995

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]