SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|330834749|ref|YP_004409477.1| from Metallosphaera cuprina Ar-4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|330834749|ref|YP_004409477.1|
Domain Number 1 Region: 1-251
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase NM domain-like 2.23e-70
Family Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 0.00000145
Further Details:      
 
Domain Number 2 Region: 242-455
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase C-terminal domain-like 1.4e-64
Family Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 0.00000483
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|330834749|ref|YP_004409477.1|
Sequence length 484
Comment 4-hydroxybutyryl-CoA dehydratase [Metallosphaera cuprina Ar-4]
Sequence
MGREVKDVTKHPFLKPSVMSFKATFDAAWQEDTKELGRAWSPYLEDEINRFNHIHRSPED
LAAKVKLLRKLSHKTGACFQRCVGWDSLNTLHIVTTLMAKKGKTEPRERFVEYLKYVQKN
DLALAGAMTDAKGVRNLKPSQQPNKNAYLRITEVTKDGIYVSGAKANITGVAATEEMVVL
PTRAMGPEDKDYAVAFAIPTDTEGVKIVVGRQLNDARRMEEGEIDGLPYFYNHEGLVIFD
NVFVPMNRVFLAGEWEYTGTLVEIFSAYHRQGYGGCKAGLGDVIIGASADLAKQIGVEKA
SHVQDKLTEMIFLTETMYSAGIAASLNAVKMCDNCWWVNPMHANVTKHLVARFPSQIAQL
SIDLAGGIVGTAPSEWDLKNPKLKEYISRYLQGAEDFTAEDRLRMVRLVENVSMGVAFQI
ESVHGAGSPAAQRIMFSRLYDLNFAQEVAKSLAGRKSSVKFTPKAEPWRESQSETEAKEA
GLKP
Download sequence
Identical sequences F4G2E5
gi|330834749|ref|YP_004409477.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]