SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|330835114|ref|YP_004409842.1| from Metallosphaera cuprina Ar-4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|330835114|ref|YP_004409842.1|
Domain Number 1 Region: 2-122
Classification Level Classification E-value
Superfamily N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 2.35e-38
Family N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 0.00047
Further Details:      
 
Domain Number 2 Region: 125-258
Classification Level Classification E-value
Superfamily Translational machinery components 9.16e-37
Family ERF1/Dom34 middle domain-like 0.0011
Further Details:      
 
Domain Number 3 Region: 260-355
Classification Level Classification E-value
Superfamily L30e-like 3.92e-20
Family ERF1/Dom34 C-terminal domain-like 0.005
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|330835114|ref|YP_004409842.1|
Sequence length 355
Comment peptide chain release factor 1 [Metallosphaera cuprina Ar-4]
Sequence
MKVLLRELKKWSAPATVLLSLYIPPGRPVSDVVNMLRQEASISQNIKLKRTRDAVESAIT
TAIDRLVPITKVPENGLVLFCGQNFDTDEFKCYMFSPPEKVTIYFYRTDKQFHTEFLEDM
VEVSEVYGLLIVERDQGTIGVLRGSRIEVLEEMEGYVPGKHMMGGQSQRRIDRIIEELYH
EFLKSFGEKVNSYLLPILESGRLKGILLGGPGYAKKEFYDSDYIDYRLKKLVLLPLVDLG
YQGEVGLREMVMKSKDLLRNQKYVEVEDLIEELKFHLAKDDGLVVYGKDEISKAMQMGAV
DSLLIFDDGNVENEKIMQEAERYGTKVYLVGEEIPEAEWVRKTFNGAVGKLRFKI
Download sequence
Identical sequences F4G3I8
gi|330835114|ref|YP_004409842.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]