SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|313201490|ref|YP_004040148.1| from Methylovorus sp. MP688

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|313201490|ref|YP_004040148.1|
Domain Number 1 Region: 662-871,904-1019
Classification Level Classification E-value
Superfamily Autotransporter 1.09e-40
Family Autotransporter 0.024
Further Details:      
 
Domain Number 2 Region: 1078-1184
Classification Level Classification E-value
Superfamily NTF2-like 0.0000000001
Family Rpa4348-like 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|313201490|ref|YP_004040148.1|
Sequence length 1191
Comment outer membrane autotransporter barrel domain-containing protein [Methylovorus sp. MP688]
Sequence
MQRFTLKPWTMLALLAFMTVRSPLSNAACVDNGDGTHTCTGTSSNTDSYIEGRVTVDSSG
GAATLNNIGTNPTLEVAPNILGSTITHTTSDGGSVATITATGNNPVTITNTGANITLDGS
ARSYDAASWSSDSNGLLYNNGVLAGYAAAIRADSLLPSLTINNSFVNNSVYYPDTGDYGI
QARITASGSYTAAILANNASLTVNSTGLILGNVLTYGGASMLAPSVLDGSQYATVLQAGK
TVINLDTGFSTIAGDLMVVDRNPLLTQAQTDNSNLVLAYSAADVGPRDSEIKLRDTAIYG
NVYLGSGRHELNLENSGVNGNIYVDQRDAQVVDVSGGVANPLYNVHGDRNFTLNSVTTVS
GNSIRNVVINDVAGATNTVNFAGYLSYLTTTVSANGLGNNTYNFECYDTINFTLPNTVLT
NPSCVIAGAVSGFTQANLTGGFTSLVTTLDVSGDIHVSGRTLLSEFGTMKAANVVVDQTG
FLEAGNVTVGLNNLMGNIVGNLVNYGTVNLGDATLNISGNASMMAGSYFIMAIGPSQTGL
LNVAGTTTFDSNSVIMPQLTRFSRAIRDGDTFVVATNASGLPQVSNTNGFLQWDVSLRGN
DLLLTADVGVPAAMRAKVTEAAIRAVDSVFQYQGTAQLPTDLQKQLLTLRNDNVISAAER
LRPEIHDGAMRTIMSNTDKVFGMLNTRLVDTYLSKNQGMASREAQEILPGKGLWVQGFGD
RGIQDSQQGIDGYNVSSAGMAFGLDREWEGDDSLRIGGAVGYARSNITNSGYTVNNRNDI
NSFMAAAYAAKTWDGAYLNTMAGVGLHTEQTRRQLMGHTATGRHDAWQYSARVEAGWPML
WREDVTLIPMASLAYSHIRESAYEENGKYSRMIVDTSRPDILQPIPVYVNGMPQYALDSS
PINLAIDARRFDSLRGGLGGKAIYSLQQKDWLAEIELRALYQHEFGDLTQDVNARFLFNT
TGFVSPGLKPDRNMYALGATVRLTGDDERDQLTLLTSYDADIRDAYFGQTMSLAVRYDFD
QGPRYQRRAEFALQRQKLRDPVLNHVQATDRDVASLHKAMQPLDAAIQDLSPQEQARRKA
IEATLQTWVSAMANRNLDTYFSTYAADFVVSDGLTRQQWERQRRMELGKDGVVQVRMADL
SIEPNGERMLALFTQTRQENGHDETVQKVVDLEQRGGRWLIVREDSIPLSE
Download sequence
Identical sequences gi|313201490|ref|YP_004040148.1| WP_013442534.1.53399

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]