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Domain assignment for gi|332160056|ref|YP_004296633.1| from Yersinia enterocolitica subsp. palearctica 105.5R(r)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|332160056|ref|YP_004296633.1|
Domain Number 1 Region: 95-308
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, catalytic domain 3.27e-49
Family MurCDEF 0.00074
Further Details:      
 
Domain Number 2 Region: 312-448
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, peptide-binding domain 1.1e-34
Family MurCDEF C-terminal domain 0.011
Further Details:      
 
Domain Number 3 Region: 1-90
Classification Level Classification E-value
Superfamily MurCD N-terminal domain 5.76e-24
Family MurCD N-terminal domain 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|332160056|ref|YP_004296633.1|
Sequence length 461
Comment UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
Sequence
MRIHILGICGTFMGGLAMLARSLGHEVTGSDANVYPPMSTLLENQGIDLIQGYSPAQLDP
APDLVIIGNAMTRGNPCVEAVLEQGIPYVSGPQWLHDHVLPGRWVLAIAGTHGKTTTAGM
VAWILEACGYEPGFVIGGVPGNFDVSARLGNSPFFVIEADEYDCAFFDKRSKFVHYSPRT
LVMNNLEFDHADIFDDLKAIQKQFHHLVRLVPGTGKIIVPDNDNHLKQVMAMGCWSEQEL
VGETGSWFARKVAGDASVFEVFLDNELVGEVSWSLVGEHNMHNGLMAIAAARHVGVLPAD
ACRALGDFINARRRLELRGEAHGVTVYDDFAHHPTAILATLAALRSKVGGTARILAVLEP
RSNTMKLGMCRNELAPSLGRADEVFLFQPQHIPWQVVEVAEACIQPAYWSADIDTLVDMV
VKTAQPGNHILVMSNGDFGGIHDKLLGALSQKAEHEAQSQE
Download sequence
Identical sequences A0A0H3NV66 A0A0H5GH48 F4N2B3
WP_005156316.1.102102 WP_005156316.1.11347 WP_005156316.1.12212 WP_005156316.1.13969 WP_005156316.1.16413 WP_005156316.1.16548 WP_005156316.1.16723 WP_005156316.1.17047 WP_005156316.1.17975 WP_005156316.1.18790 WP_005156316.1.18893 WP_005156316.1.19087 WP_005156316.1.20762 WP_005156316.1.23689 WP_005156316.1.24393 WP_005156316.1.2482 WP_005156316.1.25150 WP_005156316.1.26676 WP_005156316.1.2681 WP_005156316.1.27291 WP_005156316.1.2756 WP_005156316.1.27954 WP_005156316.1.29200 WP_005156316.1.32298 WP_005156316.1.33645 WP_005156316.1.33842 WP_005156316.1.34535 WP_005156316.1.36310 WP_005156316.1.36845 WP_005156316.1.37307 WP_005156316.1.37339 WP_005156316.1.37377 WP_005156316.1.3739 WP_005156316.1.41617 WP_005156316.1.42927 WP_005156316.1.4568 WP_005156316.1.46310 WP_005156316.1.49096 WP_005156316.1.50284 WP_005156316.1.50913 WP_005156316.1.51802 WP_005156316.1.52128 WP_005156316.1.52282 WP_005156316.1.52510 WP_005156316.1.54645 WP_005156316.1.55167 WP_005156316.1.56946 WP_005156316.1.57251 WP_005156316.1.59314 WP_005156316.1.60054 WP_005156316.1.60229 WP_005156316.1.6227 WP_005156316.1.6276 WP_005156316.1.64607 WP_005156316.1.64724 WP_005156316.1.6623 WP_005156316.1.67544 WP_005156316.1.67688 WP_005156316.1.68551 WP_005156316.1.7028 WP_005156316.1.70521 WP_005156316.1.73937 WP_005156316.1.73944 WP_005156316.1.74370 WP_005156316.1.75238 WP_005156316.1.75560 WP_005156316.1.75717 WP_005156316.1.75818 WP_005156316.1.77263 WP_005156316.1.78074 WP_005156316.1.78907 WP_005156316.1.78961 WP_005156316.1.78974 WP_005156316.1.79061 WP_005156316.1.79150 WP_005156316.1.79299 WP_005156316.1.79375 WP_005156316.1.80565 WP_005156316.1.81839 WP_005156316.1.8184 WP_005156316.1.82708 WP_005156316.1.83529 WP_005156316.1.84522 WP_005156316.1.84626 WP_005156316.1.8474 WP_005156316.1.85902 WP_005156316.1.86289 WP_005156316.1.91362 WP_005156316.1.91446 WP_005156316.1.92887 WP_005156316.1.93960 WP_005156316.1.94848 WP_005156316.1.96208 WP_005156316.1.9637 WP_005156316.1.96818 WP_005156316.1.99238 gi|386311092|ref|YP_006007148.1| gi|332160056|ref|YP_004296633.1|

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