SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|307720151|ref|YP_003891291.1| from Sulfurimonas autotrophica DSM 16294

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|307720151|ref|YP_003891291.1|
Domain Number 1 Region: 83-175
Classification Level Classification E-value
Superfamily Ribosomal protein L6 2.16e-33
Family Ribosomal protein L6 0.0000544
Further Details:      
 
Domain Number 2 Region: 2-82
Classification Level Classification E-value
Superfamily Ribosomal protein L6 6.24e-17
Family Ribosomal protein L6 0.0008
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|307720151|ref|YP_003891291.1|
Sequence length 178
Comment 50S ribosomal protein L6 [Sulfurimonas autotrophica DSM 16294]
Sequence
MSRIGKNPVEFASDISVTTNGNVITFAKGKNSVDLDTKGYVTFEVEGNTLTFKNLSDSRE
HRAFWGTFRALAQNIVTGLTTGYSKQLEINGVGYRAAVKGKVLNLQLGFSHDINYELPEG
LEASVEKNVITLKSHDKQMLGQAAAEIRSFRPPEPYKGKGVKYIDEHIVRKAGKTAKK
Download sequence
Identical sequences E0UTP8
gi|307720151|ref|YP_003891291.1| WP_013326035.1.28870

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]