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Domain assignment for jgi|Lacbi1|326420|fgenesh3_pg.C_scaffold_10000091 from Laccaria bicolor S238N-H82

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  jgi|Lacbi1|326420|fgenesh3_pg.C_scaffold_10000091
Domain Number - Region: 811-839
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00133
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Lacbi1|326420|fgenesh3_pg.C_scaffold_10000091
Sequence length 918
Sequence
MIVHSQRTRGLQEVVTAARAIFTGTSPYLTSLRVTTPLTLGTSRLPIPTSTRPSSSKTSV
PEVPTPETTWRKGPTLALTLQAPIGSKETPVMRDPPPHQPLPSGPSGSASPTITPISNES
VPTTSLSAVEPTVDPALNSSLNRQGMERGYSLSPMYSLILEYNREQGDNLSTAAEVSWIL
QKPILKPQDIEKGGDDSDPYTAYRQSEVPLSPLSTVPELYDEIDNIDSVDDRMRFMLDNV
PRHQNQILSGAREALRDGLGWDVICPTPPLPSAAISQPSTSEFSRTRIAQGKKKVDWDDS
APWENTSTSVEQGRNLDEGLEPSFGFQTPFKKGTHFFDTTTEGLSPAFFSMPGLGSATDV
TVGLATPSRTELSENVREYSANQGTNALTITKRIPDSTQAATTAPTSSSSFKNVNPFASN
GYNGSPQVPPNGGGGNGGGGGNSPQRGGGNGLPHSGGGGGGDPGRGPHNPGGGGGPSNNL
PPRTPQFYSNPGGGSGGGGGGDPGGGGGPSPQNNDSWPPAPYGNMPASIKTELKVEQLPE
WDGNHWTAIDYFWQIQQLAYLGGWLPEALGYWLWFHLKDSSPVRRWFVTLPLAHQSYMRS
HYLRFLKGIKDGFLGHCWQLKMNNYYNAQTFRERNHERELPSEFIIRRIIYTRMLLSVDA
GGPLEVFYIMRKAPVSWGPILLLSSIKDSSELYSRVTEHEEALLEAYRVSRGGQTPSIDN
IVTQLKQMGFVQERQSHQRRANMVEYSASTDFMPVPSTDDVVSASSTAVEDLSSGQYILR
EAYQVLRQRPRLPPKGGYPFSKNDHITTKMGKMPPSPCKCCGSANHWDKECPDWNTYLER
AKRSANSVEIWPEDEADKAYASAYSVLLNERLTDQSTNQPVPLESPIQQGFEQASSTSQT
PAEEANGLLWKKWKTRIT
Download sequence
Identical sequences 29883.JGI326420 jgi|Lacbi1|326420|fgenesh3_pg.C_scaffold_10000091

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