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Domain assignment for gi|71278669|ref|YP_270668.1| from Colwellia psychrerythraea 34H

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|71278669|ref|YP_270668.1|
Domain Number 1 Region: 3-290,473-531
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 7.4e-89
Family FAD-linked reductases, N-terminal domain 0.0000715
Further Details:      
 
Domain Number 2 Region: 292-474
Classification Level Classification E-value
Superfamily FAD-linked reductases, C-terminal domain 1.37e-61
Family GMC oxidoreductases 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|71278669|ref|YP_270668.1|
Sequence length 561
Comment choline dehydrogenase [Colwellia psychrerythraea 34H]
Sequence
MKTHLYDYIIVGAGSAGCVLANRLSEDGNSNVLLLETGGSDKSIFIQMPTALSIPMNSSK
YAWQFETEPEPFIDNRRMHCPRGKVLGGSSSINGMVYVRGHARDFDEWQQYGADNWDYAH
CLPYFKKAETWAFGGDEYRGNDGPLGVNNGNKMANPLYKAFVNAGVDAGYFSTDDYNGSQ
QEGFGAMHMTVKDGVRCSTANAYLRPAMTRKNLTVITHALVHKVLLENKTAVGIRYERKG
QVLDVKVNKEVILSAGSIGSPHLLQLSGIGAKNVLTEAGIETLHDLPGVGQNLQDHLEFY
FQFKCNQPISLNGKLGLWNKFLIGTRWILNKDGLGATNHFESCGFIRSKANVEWPDLQYH
FLPAAMRYDGKEAFAGDGFQVHVGHNKPKSRGSVNVASNDPKAPPKISFNYLEHEEDRAG
FRACVRLTREIIHQPALDEYRGEEIQPGAHIQTDEEIDAFVRSAVESAYHPSCSCKMGVD
DLAVVDPQTRVRGIKGLRVVDSSIFPTIPNGNLNAPTIMVAERAADLIRGLDTLAPSNEK
VDITPNWQQQQRPREATRNIK
Download sequence
Identical sequences Q47X03
167879.CPS_4010 gi|71278669|ref|YP_270668.1| WP_011044754.1.15195

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