SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|88602286|ref|YP_502464.1| from Methanospirillum hungatei JF-1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|88602286|ref|YP_502464.1|
Domain Number 1 Region: 5-271
Classification Level Classification E-value
Superfamily TPR-like 6.98e-39
Family Tetratricopeptide repeat (TPR) 0.003
Further Details:      
 
Domain Number 2 Region: 250-586
Classification Level Classification E-value
Superfamily TPR-like 2.28e-38
Family Tetratricopeptide repeat (TPR) 0.0093
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|88602286|ref|YP_502464.1|
Sequence length 614
Comment tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Sequence
MHTNEKELIMQRAAYHAKCEEFDMALSCIQMIIDEDPEDSVAWYNKGYTLHLSGKFDEAR
DLFLNLHSRFPEKADVCFEIGRIALKRGDLSEAEEYFTKCIALEPLRPEPRIELGKMWYD
SGYYHKSADSFTEALVFDPDNPEIRTYLGLISHKLDKPEEAERWFRESLDYDPDNTETLF
YCARLYEEMGRWEDELWCYNRLIEIDPEQVIPWLKKGMLYLSRDDLSMAVSFFRMASRLD
ADSHLPHLLLGLVYSTLDRHEEAIASLEKAVLLSDEPDILLQYGRVLGACNRYEDALDVF
DSVLMQRPGDPNAAEGYARSLYHLQRWDDLVSFCEKERGEDPDNSFWITTLARVWGWHLS
EVDKAVTILYKWLDQYNGTQISLVLADLLVHSEQFEEARTLLSALLENKPEDYQILFRYA
SLLAQIKEFEKAAEQFELLLHQRPADGHLAYLAGQACEQSGDPDRALEFFTRAVTSIPDS
AEIWLSRARVLFELGQFAESAVNAAQAASLNPDWSDAFLLKGMSEIHAEEYDKARISLTC
VTTLDPENPDGWRNLGDVLLLAGEEAAARICYERTLTLDPEDLRAQDGYKVCTDILIGRS
SSDQSEEPISDEHQ
Download sequence
Identical sequences Q2FQT8
323259.Mhun_0995 gi|88602286|ref|YP_502464.1| WP_011448024.1.85653

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]