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Domain assignment for gi|88603493|ref|YP_503671.1| from Methanospirillum hungatei JF-1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|88603493|ref|YP_503671.1|
Domain Number 1 Region: 87-185
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 5.75e-27
Family Ribosomal protein S3 C-terminal domain 0.00046
Further Details:      
 
Domain Number 2 Region: 6-95
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 1.01e-20
Family Prokaryotic type KH domain (KH-domain type II) 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|88603493|ref|YP_503671.1|
Sequence length 237
Comment 30S ribosomal protein S3 [Methanospirillum hungatei JF-1]
Sequence
MAVERKFVADGVRKVRVERHLGHELKRAGYGGMDLIRTPLGTQVTIFAEKPGIVIGKGGK
VVRTLTQDLATTYGVESPQIEVQQVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRI
MDSGALGCEVVISGKLTGARGRVQKFTEGYIKHSGDPVNTLVDKGYAVAIKKLGVIGVQV
RLIPPGAQLPDHFEVTAAVTKKQRNMAHITRIPSEYDEEDLDLDAIVNEPDDFMEEE
Download sequence
Identical sequences Q2FT39
gi|88603493|ref|YP_503671.1| WP_011449210.1.85653 323259.Mhun_2247

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