SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|390945642|ref|YP_006409402.1| from Alistipes finegoldii DSM 17242

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|390945642|ref|YP_006409402.1|
Domain Number 1 Region: 3-278
Classification Level Classification E-value
Superfamily Metallo-hydrolase/oxidoreductase 1.39e-49
Family ROO N-terminal domain-like 0.0000271
Further Details:      
 
Domain Number 2 Region: 250-393
Classification Level Classification E-value
Superfamily Flavoproteins 4.19e-29
Family Flavodoxin-related 0.0053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|390945642|ref|YP_006409402.1|
Sequence length 395
Comment flavoprotein [Alistipes finegoldii DSM 17242]
Sequence
MNITEILPGIHYVGVNDRTTTRFEGLWSLPHGVSYNAYLVADEKVALIDTVEEAFGSRLF
ENIRETIGDRPIDYLVVNHMEPDHSSSIRALRLLYPDIRIVGNAKTLQMIQGFYGIDTGT
LEVKEGDTISLGAKTLSFYMAPMVHWPETMVTWCAEAGTLFSGDAFGTFGAIDGGITDSQ
LDPSRYWDEMRRYYACIVGKYGGPVQKALAKVRGLNPTTICSTHGPVWQRQIPQVMDIYD
RLSRYEGEPGVVLAYGSMYGNTEQMAERIARELASRGVGPIVMYNLSFADESVVLRDVFR
YDTLIVGAPTYNGGIYPPAARLLDLIAARCVPQRNFGWFGSFCWAGAAVRGMGEFAQRMK
WEPICDPVEMKQGFSSGCHDFCSRFADGVAERFRR
Download sequence
Identical sequences E4ME06 I3YI99 R5V916
gi|390945642|ref|YP_006409402.1| WP_009598603.1.56960 WP_009598603.1.9852

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]