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Domain assignment for gi|390945835|ref|YP_006409595.1| from Alistipes finegoldii DSM 17242

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|390945835|ref|YP_006409595.1|
Domain Number 1 Region: 90-372
Classification Level Classification E-value
Superfamily DNA breaking-rejoining enzymes 2.03e-55
Family Lambda integrase-like, catalytic core 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|390945835|ref|YP_006409595.1|
Sequence length 379
Comment site-specific recombinase XerD [Alistipes finegoldii DSM 17242]
Sequence
MAEIKEPIRIRRKKLTNGNVSLYLDIYLNGKREYEFLKLYLIPEKTKADREANRQTLQLA
NSIKARRIVEVQNGEHGFKSAYASDTLFFDYYRAMCARRLGAESTGNWGNWKSCLKHLQK
YEPNERIRFSQITQEWVQGFRDYLEKDACAWSCDERDRIKDHPLSRNSRVSYFNKLRACL
NQAYEDRIIPINPMRGVEGFKAEEGTRMYLTIEEVQRLAQTECEYPAIKRAFLFSCLTGL
RRSDVIRLTWGDVHQQGEFTRIIFKQKKTSGQEYLDIPPQAAELMGERGKDAEHIFPNIH
SPSCTNETIKRWVLRAGIHKDITFHCGRHTFAVMMLDLGTDIYTVSKLLGHRELSTTQIY
AKVLDKNKQAAVAKIPDIF
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Identical sequences B0MZX9 I3YIU2
WP_004328754.1.43182 WP_004328754.1.56960 gi|390945835|ref|YP_006409595.1|

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