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Domain assignment for gi|390946532|ref|YP_006410292.1| from Alistipes finegoldii DSM 17242

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|390946532|ref|YP_006410292.1|
Domain Number 1 Region: 109-234,275-307,340-451
Classification Level Classification E-value
Superfamily DNA breaking-rejoining enzymes 1.94e-21
Family Lambda integrase-like, catalytic core 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|390946532|ref|YP_006410292.1|
Sequence length 486
Comment site-specific recombinase XerD [Alistipes finegoldii DSM 17242]
Sequence
MKIPKATVTAVLYKSKTLASGEHPVMIRVCYNSKRRYKSTGLSCPAKWWNAAKQEVRERH
PLAPNMNAIIGSELTALKNKVLDFERQGVPYSVQRIFEASVRKPPPRKTLYDLFEERIAY
FRDTLQKHNTATGYQTLLHIVERFSQHRTVELFDVDGAWLGEFEEYLHARYADTSIKRFF
SALKALMNYACQNGLLDANPFDRFRLSRRLDVRTAKRALATDELDSLIRYYLDTYYYKTR
KRPDPRTMKRRCWRAPSCGCRGEERQASYDAEQFALSMFICSYIFQGLALVDLARLKWKD
LVCVEIPDREKYDRDCAAYGPRYAEAHKETVAFYEINFVRAKTLHPIRILVEQRVAWPYM
KPFARTAKGGAGDDFVFPIYFDDDPQRRFERITYANNVINQGLQRAAKRIGLSRKITFYS
ARHTYASRLYHADVPLPLIAQNMGRNPAEIETYLKEFDTDRIISANKRVWQIPGPASKDP
KTGAGL
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Identical sequences I3YKT9
gi|390946532|ref|YP_006410292.1| WP_014775187.1.56960

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