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Domain assignment for gi|20093150|ref|NP_619225.1| from Methanosarcina acetivorans C2A

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|20093150|ref|NP_619225.1|
Domain Number 1 Region: 13-319
Classification Level Classification E-value
Superfamily Pectin lyase-like 2.43e-44
Family Pectate transeliminase 0.072
Further Details:      
 
Domain Number 2 Region: 329-502
Classification Level Classification E-value
Superfamily Pectin lyase-like 4.65e-21
Family Pectin lyase 0.058
Further Details:      
 
Domain Number 3 Region: 462-610
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.00000204
Family Galacturonase 0.062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|20093150|ref|NP_619225.1|
Sequence length 645
Comment cell surface protein [Methanosarcina acetivorans C2A]
Sequence
MNGKRILILTTVFILLIFLSGSASAATFHVKVGGGTESYGSLQEAVNAASDGDLILVGEG
RYSENVLVNKSLEIVSESSNPKKTVITAPDPELPVLHITSDSVNIGGFSLKGANSSYGIY
LEGVSGNNIYNNYFSGNWRSIMLRDSHTNSLENNRLSDSDDGIWLEHSEQNLIKNNRATR
NRHYGFYLNASENNTLQKNRASGGAVGIYMENSSGCCVLSSKTSNNFYGIYLVDSGGSLL
EKNTANSNKMYGIYLGSSNGSTLRGNKANSNQWGIYLDSNSNILRKNKMSCNSRNFGAYT
YHYTGEMNNTIDTSNTVDGKPIYYLVGVSDRTLDSDSNAGVVYCINCENITLKDLALENN
SFGIYLYNTQNSRIEGNCISNCEHGIYLGNCALTALRGNAVNSNEGDAFILSSCRNCLVE
ENNALDNMAGIWLCDTSVDNLLKENIITSNSWCCIDLGDTSCNNTLEGNILSEAYEGIYL
YGACEENILNNNTITASSYGLYTEGCGNNTISGNRISGNDVGISLNLNWTDGTSSDYNII
YNNYLNNTQNAEDYGTNTWNTSKTTGVNIAGGPYLGGNLWASPEGDGFSETASDEDGDLI
ADLPYNITETAYDYLPLIFKEPEEKTETEGGKNCGKSKSAWRKSE
Download sequence
Identical sequences Q8THZ5
MvR248 WP_011024242.1.98848 188937.MA4363 gi|20093150|ref|NP_619225.1|

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