SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for MES00005072377 from Global Ocean Sampling Expedition (GOS)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MES00005072377
Domain Number 1 Region: 168-455
Classification Level Classification E-value
Superfamily Methionine synthase activation domain-like 1.83e-90
Family Methionine synthase SAM-binding domain 0.000000333
Further Details:      
 
Domain Number 2 Region: 9-158
Classification Level Classification E-value
Superfamily Cobalamin (vitamin B12)-binding domain 5.63e-41
Family Cobalamin (vitamin B12)-binding domain 0.00000371
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) MES00005072377
Sequence length 456
Comment Putative uncharacterized protein GOS_1146925 (Fragment) OS=marine metagenome Pep=JCVI_PEP_1096682757933 SV=1
Sequence
MAAEKVGGSTQGSFLIATVKGDVHDIGKNIVGVVLACNNYAVTDLGVMTPTEKIVAEALR
LKPDFIGLSGLITPSLDEMINVAKELKRAGVSTPLLIGGATTSREHTAIKLAEHYDGPMV
HVGDASLVTTVCGDLLNPARREGFVTELRTAQDGLRTEYERRQPVATVTLEEARKRPLVT
TAPVQPPPRRPGVTLFERIDPAAVAEIIDWTPFFVSWSLKGAFPQIFASEKFGAEARRTF
DAGRKELDEIIRAGRVHLRGVAGLWPARRVGDDVEVYADEAQAEKIGRFHFLRDQTVRPK
VTSFRSLADLVSTGKGDHIGAFAVTAGQEIEDYAASFKEKDSFRHIMIQALADRLAEGCA
EWLHREVRKDLWGYAPDETLTVQELIKEEYDGRRPAAGYPACPEHTEKGELWRLLDADRI
GCTLTESYAMNPAASVSGLYFGNPQSIYFDVDNLGR
Download sequence
Identical sequences MES00005072377

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]