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Domain assignment for MES00005581547 from Global Ocean Sampling Expedition (GOS)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  MES00005581547
Domain Number 1 Region: 401-501
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain 7.98e-27
Family Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.0016
Further Details:      
 
Domain Number 2 Region: 334-399
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 1.01e-17
Family Mechanosensitive channel protein MscS (YggB), middle domain 0.0009
Further Details:      
 
Domain Number 3 Region: 247-332
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region 0.0000000196
Family Mechanosensitive channel protein MscS (YggB), transmembrane region 0.0034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) MES00005581547
Sequence length 535
Comment Putative uncharacterized protein GOS_2044698 (Fragment) OS=marine metagenome Pep=JCVI_PEP_1096699866261 SV=1
Sequence
LVFYTLHRILSPDGVAILHFHWPPANVAFFRQHLRRLGLVVMALVAVVSIAEHQPASLAN
DVIGIAVVLSCYALMAWLLFHLLFSAPLRENTSALRTGVGVLFNLLPLALIGAVAFGYYY
TALKLTDRLIDTLYLLIILLIVEATLVRGLSVAARRLAYQRALAKRQAQAKDGTEGEAVI
EEPTLDIEQVNQQSLRLIRLALLGGFLVCLYWVWADLIGVFTYLDTINLYEYSSGTGDNA
TLVPISLMDVMGALIIVAITVALARNLPGLLEVLVLSRMRLAQGSAYATTTLLSYVLVGI
GIVTTLSTLGVSWDKLQWLVAALSVGLGFGLQEIFANFISGLIILFERPVRIGDVVTIGN
LSGTVSKIRIRATTITDFDHKEIIVPNKTFITGQLINWSLSDTVTRVTLKVGVGYGSDLD
LVRKLLLQAAQENPRVLKEPSPIVYFLNFGESTLDHELRIHVRDLGDRNPATDEINRFIE
REFPKNGINIAFRQVEVYVKNLEHGEQKLDQKDLAKAAAAGAASLQQPPKPPAAP
Download sequence
Identical sequences MES00005581547

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