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Domain assignment for MES00005591164 from Global Ocean Sampling Expedition (GOS)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  MES00005591164
Domain Number 1 Region: 101-199
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain 1.1e-34
Family Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.0000911
Further Details:      
 
Domain Number 2 Region: 33-99
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 2.98e-17
Family Mechanosensitive channel protein MscS (YggB), middle domain 0.00015
Further Details:      
 
Domain Number 3 Region: 2-32
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region 0.000000183
Family Mechanosensitive channel protein MscS (YggB), transmembrane region 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) MES00005591164
Sequence length 201
Comment Putative uncharacterized protein GOS_2062427 (Fragment) OS=marine metagenome Pep=JCVI_PEP_1096683926011 SV=1
Sequence
VVIASLDQLGIETTSLVAILGAAGLAVGLALKDSLGNFAAGVMLILFKPFRVGHYVEAGG
TSGTVKEIRIFATIMNSPDNKVLTVPNGAIMSGNIVNYSEKPTRRVDMVFGVAYDADLSV
VKKVLEEILAADERVLKDPAPTIVVGELADSSVNFLCRPWVNSADYWPVLWDTTEAAKLR
FDEAGIGIPFPQMDVHLDKND
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Identical sequences MES00005591164

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