SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for MES00006072804 from Global Ocean Sampling Expedition (GOS)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MES00006072804
Domain Number 1 Region: 586-912
Classification Level Classification E-value
Superfamily Methionine synthase activation domain-like 7.46e-122
Family Methionine synthase SAM-binding domain 0.0000000601
Further Details:      
 
Domain Number 2 Region: 29-303
Classification Level Classification E-value
Superfamily Dihydropteroate synthetase-like 7.72e-94
Family Methyltetrahydrofolate-utiluzing methyltransferases 0.0025
Further Details:      
 
Domain Number 3 Region: 423-579
Classification Level Classification E-value
Superfamily Cobalamin (vitamin B12)-binding domain 1.06e-42
Family Cobalamin (vitamin B12)-binding domain 0.00000235
Further Details:      
 
Domain Number 4 Region: 322-413
Classification Level Classification E-value
Superfamily Methionine synthase domain 7.32e-27
Family Methionine synthase domain 0.0000243
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) MES00006072804
Sequence length 912
Comment Putative uncharacterized protein GOS_2927903 (Fragment) OS=marine metagenome Pep=JCVI_PEP_1096686543529 SV=1
Sequence
ITRIRTAMTDHMMRLAGLEPFNVTSGTLFINVGERTNVTGSKAFARMILNGQFDEALAVA
RQQVENGAQVIDINMDEAMLDSKAAMVRFLNLIASEPDIARVPIMIDSSKWEVIEAGLKC
VQGKAIVNSISLKEGEDAFRHHAHLIRRYGAAAVVMAFDETGQADTYERKIEICTRSYNF
LVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFIEATRWIKQNLPYAKVSGGVSNVSF
SFRGNDPVREAIHTVFLYHAIQAGMDMGIVNAGQLGVYADLDPELRERVEDVILNRRDDS
TDRLLEIADKFKAGGAKKEENLEWRNQPVEKRLSHALVHGITNFIVEDTEEVRAKIAAAG
GRPINVIEGPLMDGMNIVGDLFGQGKMFLPQVVKSARVMKQAVAHLIPFIEEEKRLLAEA
GGDVRAKGKIVIATVKGDVHDIGKNIVSVVLQCNNFEVVNMGVMVPCNEILAKAKVEGAD
IIGLSGLITPSLEEMAYVASEMQRDDYFRVKKIPLLIGGATTSRVHTAVKIAPHYEGPVV
YVPDASRSVSVASSLLSDEGATKYLDELKSDYERIRDQHANRKAQPMVTLAEARANKTKV
DWAGYQPVKPKFIGRRVFKNYDLNELAQYIDWGPFFQTWDLAGPYPAILNDEIVGESARR
VFSDAKSMLARLIQGRWLTASGVISLLPANTVNDDDIEIYSDESRSEVLLTWRNLRQQSV
RPVVDGVMRPNRSLADFIAPKESGVADYIGMFAVTAGLGVDAKEKQFEADHDDYSAIMLK
ALADRFAEAFAEAMHARVRRELWGYASGETLDNDALIAEKYAGIRPAPGYPACPDHLVKR
DMFDVLRADEIGMSVTDSLAMLPAASVSGFYLAHPDSTYFSVGKIGQDQLEDYAQRMALS
LDDARRALAPQL
Download sequence
Identical sequences MES00006072804

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]