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Domain assignment for ENSMUSP00000116869 from Mus musculus 63_37 (longest transcript per gene)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMUSP00000116869
Domain Number 1 Region: 5-169
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.06e-30
Family MAM domain 0.0013
Further Details:      
 
Domain Number 2 Region: 224-261
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000236
Family LDL receptor-like module 0.0019
Further Details:      
 
Domain Number 3 Region: 180-217
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000288
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 4 Region: 264-301
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000484
Family LDL receptor-like module 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000116869   Gene: ENSMUSG00000075520   Transcript: ENSMUST00000146205
Sequence length 321
Comment pep:novel chromosome:NCBIM37:2:15963753:16072433:1 gene:ENSMUSG00000075520 transcript:ENSMUST00000146205
Sequence
YTSTAGSCNFETTSGDWTVECGLTQDPEDDLDWSIGSIIPTEGLSRDSDHTPGSGRHFLY
VNTSLAEEGSTARIITSHFFPASLGICTVRFWFYMVDPHIVGILKVYLIEKSGLNILMWS
MMRNKNTGWTYAHVPLSSNSPFKVAFEADLGGKEDIFIALDDITFTPTCASGGPALPQPP
LCEEGQFACIYALQCVSASEKCDGQEDCIDGSDEMNCSLGPSPQPCSDTEFQCFESQCIP
SLLLCDGVADCQFNEDESSCVNQSCPSGALACNSSGLCIPAHQRCDGTAHCKDIQVDESS
CSECPIHYCRNGGTCVIENIG
Download sequence
Identical sequences ENSMUSP00000116869 ENSMUSP00000116869 10090.ENSMUSP00000097957 ENSMUSP00000116869

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