SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMUSP00000026476 from Mus musculus 76_38

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMUSP00000026476
Domain Number 1 Region: 3-81
Classification Level Classification E-value
Superfamily DNA-binding domain 0.000000392
Family Methyl-CpG-binding domain, MBD 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMUSP00000026476   Gene: ENSMUSG00000025409   Transcript: ENSMUST00000026476
Sequence length 1005
Comment pep:known chromosome:GRCm38:10:127281956:127288890:-1 gene:ENSMUSG00000025409 transcript:ENSMUST00000026476 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNGDNASSAADRAGGPAATPVPIPIGWQRCVREGAVYYISPSGTELSSLEQTRSYLLSDG
TCKCGLECPLNVPKVFNFDPLAPVTPGGAGVGPASEEDMTKLCNHRRKAVAMATLYRSME
TTCSHSSPGEGASPQMFHTVSPGPPSVRPPCRAPPTTPLNGGPGSIPQDPPSVPQAFPPL
TGPAGLFPPPRLPDPVPSAGSSSPCFLPRGNAPSPAPPPPPAISLNAPSYNWGASLRSNL
VPSDLGSPPAPHASSSPPSDSPLFHCSDALTSPPLPPSNNPPGPPGPPGPATQPPVSSAT
MHLPLVLGSLGGAPAVEGPGAPPFLASSLLSAAAKAQLPPPSTLQGRRPRAQAPSAAHAS
PRPSQRRPRRPPTVLRLLEGGGPQTPRRTRPRAPAPVPQPFPLPEPSQPILPSVLSLLGL
PTPGPSHSDGSFNLLGSDAHLPPPPALSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAP
PAASKAPVVPSPVLQSPSDGLGMGAGPACPLPPLAGGEAFPFPSPEQGLALSGAGFPGML
GALPLPLSLGQPPPSPFLSHSLFGVLAGGGQPPPEPLLPPPGGPGPPSAPGEPEGPSLLV
ASLLSPPPSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPNGEPFSGLGDL
PPLLFPPLSAPPTLIALNSALLAASLDPPSGTPPQPCVLSAPQPGPPTSSVTTATTDPGA
SSLGKAPSNSGRPQLLSPLLSASLLAGDLSSLASSPGALPSLLQPPGPLLSSQLGLQLLP
GGGAPPALSEASSPLACLLQSLQQIPPEQPDAPCLPPESPASALEPEPARPPLSALAPPH
ASPDPPVPELLTGRGSGKRGRRGGGGLRGINGETRPGRGRKPGSRREPGRLALKWGTRGG
FNGQMERSPRRTHHWQHNGELAEGGAEPKDPPLPGTHSEDLKVPPGIVRKSRRGRRRKYN
PARNSSSSRQDVTLEPSPTTRAAVPLPPRARPGRPAKNKRRKLAP
Download sequence
Identical sequences E9Q572
ENSMUSP00000026476 ENSMUSP00000026476 NP_149063.2.92730 XP_011241568.1.92730 XP_011241569.1.92730 XP_011241570.1.92730 XP_011241571.1.92730 XP_011241572.1.92730 ENSMUSP00000115238 10090.ENSMUSP00000026476

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]