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Domain assignment for Medtr3g116480.1 from Medicago truncatula

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Medtr3g116480.1
Domain Number 1 Region: 30-540
Classification Level Classification E-value
Superfamily ARM repeat 1.86e-93
Family Clathrin adaptor core protein 0.0011
Further Details:      
 
Domain Number 2 Region: 617-771
Classification Level Classification E-value
Superfamily Clathrin adaptor appendage domain 2.51e-54
Family Coatomer appendage domain 0.0000124
Further Details:      
 
Domain Number 3 Region: 772-884
Classification Level Classification E-value
Superfamily Subdomain of clathrin and coatomer appendage domain 9.42e-34
Family Coatomer appendage domain 0.00069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Medtr3g116480.1
Sequence length 887
Comment | coatomer subunit gamma-like protein | HC | chr3:54482735-54492107 | 20130731
Sequence
MAQPLVKKDDDRDDEAEYSPFMGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG
ETFTKTEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID
MYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPIVASAALVSGIHLLQTNPEIVKRWS
NEVQESVQSRAAFVQFHALGLLHQIRQNDRLAVSKLVSSLTRGAVRSPLAQCLLIRYTSQ
VICESGNNTQSGDRPFYDFLESCLRHKSEMVIFEAARAITELNGVTSRELNPAITVLQLF
LSSSKPVLRFAAVRTLNKVAMIHPTSVTNCNIDMESLISDQNRSIATLAITTLLKTGNES
SVDRLMKQITNFMSDIADEFKIVVVEAIRSLCQKFPLKYRSLMNFLSNILREEGGFEYKK
AIVDSIVILIREIPDAKETGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRF
IYNRVHLENATVRAGAVSTLAKFGAAVDELKPRIFVLLRRCLFDSDDEVRDRATLYLNTL
GGDGSVVETDKAVKDFLFGPFDIPLVNLETGLKNYEPSEEAFDIDSVPKEVKSQPLAEKK
ASGKKPTGLGAPPSGPPSTADAYQRALSSIPEFANFGNLFKSSAPVELTEAETEYAVNVV
KHIFDRHVVFQYNCTNTIPEQLLEHVIVIVDNSEADEFSEAFSKPLKSLPYDSPGQIFVA
FEKPEGVPTLGKFSNVLKFIVREVDPTTGEAEDDGVEDEYQLEDLEIVSADYTLKVGVSN
FRNAWESMGPDFERVDEYGLGPRESLAEAVNTVINLLGLQPCEGTEVVPPNSRSHTCLLS
GVFIGNIKVLVRLSFGLDGPKDVAMKLTVRSEDETVSDAIHEIVASG
Download sequence
Identical sequences G7J6K1
XP_003603909.1.50012 Medtr3g116480.1

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