SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for Medtr8g063060.1 from Medicago truncatula

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Medtr8g063060.1
Domain Number 1 Region: 58-150,254-335
Classification Level Classification E-value
Superfamily Zn-dependent exopeptidases 7e-32
Family Bacterial dinuclear zinc exopeptidases 0.00012
Further Details:      
 
Domain Number 2 Region: 160-244
Classification Level Classification E-value
Superfamily Bacterial exopeptidase dimerisation domain 0.00000000082
Family Bacterial exopeptidase dimerisation domain 0.00029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Medtr8g063060.1
Sequence length 379
Comment | M20/M25/M40 family peptidase | LC | chr8:26393123-26391875 | 20130731
Sequence
MRGNNWVQPNVFFGEKVFIEGVVMVMTTTDISNCYQENIAQYVCSCQIFNLVYTSCPQEL
VDWDHKSKVDGKIHACAHDAHVVMLLGAAKILQEMKDILKEKGTGAKLMVEENVLNKVEA
IFGIHLMPHKFLPQGVVASRPVELGAGCGSFLVKIERDQQCLNPVLAVASSIVSLQQLVS
REVDPLDSQVVTVAMVHSGTDESVAFGVSFRAFGRQSFNNFRTRIKEIIQGQTGVYMCSA
EVDFESNHATIPPTINDEGVYQLGRKAACMIVGEENVRLASKISGSEDFAFYLEKVSVTF
FQLGSNSNHSTHNPYFSLLDEEALPIGAAVHAAFVVLCVLARTRVRMRARLCRGWFQEKD
FTELMMRDNNWVQPSVFFG
Download sequence
Identical sequences G7LFE7
Medtr8g063060.1 XP_003628650.1.50012

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]