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Domain assignment for Medtr1g046200.1 from Medicago truncatula

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Medtr1g046200.1
Domain Number 1 Region: 4-99
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 6.67e-18
Family B3 DNA binding domain 0.0016
Further Details:      
 
Weak hits

Sequence:  Medtr1g046200.1
Domain Number - Region: 273-321
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000294
Family B3 DNA binding domain 0.014
Further Details:      
 
Domain Number - Region: 200-243
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0471
Family B3 DNA binding domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Medtr1g046200.1
Sequence length 324
Comment | plant-specific B3-DNA-binding domain protein | LC | chr1:17394491-17392825 | 20130731
Sequence
MAKDYPDFFKVFSTEKHTERMRIPNAFVNLMRSKRKVIKDFILRDRRGRDWHVKARLIGD
ELYFDGGWKQFREENSLEEDDFLVFTHIENTVFRFKILELSSMCEKKKVSVVEENNNMED
EEEVNDGDDDDEDDDYEYDAAAAADDDGDDDDENERMYKEISRSKHQHCRTCCKCKAGNI
GSSSARSKLEDDEIDAEIYIQPGNPHFIAKYIHSRPNELFIPKNVIKDFCLCFTKHVTLE
CCHCKDIQSNDLAAYHHILPQISTIHIEKRGQVRTWRDGRVRVLGWEDFCRKSKITENDS
CLCEIVLREDGTIRILRVHVVRKE
Download sequence
Identical sequences A0A072VGJ6
Medtr1g046200.1 XP_013467138.1.50012

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