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Domain assignment for Medtr1g105780.1 from Medicago truncatula

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Medtr1g105780.1
Domain Number 1 Region: 40-126
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000114
Family B3 DNA binding domain 0.0076
Further Details:      
 
Weak hits

Sequence:  Medtr1g105780.1
Domain Number - Region: 178-251
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000255
Family B3 DNA binding domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Medtr1g105780.1
Sequence length 274
Comment | transmembrane protein, putative | HC | chr1:47729690-47730765 | 20130731
Sequence
MAFHHNNVAMLSYSMLIAPLDPNPVTEMDRRINELRLKYRTYMVEVDVDYGAIMMPMMFS
HDFGDQIQQYATLVDPKRNQFEVLVERNNQGIYLTKGWHAIRDFYKVQFGSWVTVVFMGD
GRFDIRMKNKFGKRIRYPTFNPPMNFRVEHSAVPVTVDWFVPRPFMHDGMNFQFTYEKKL
AVADVESGFLELAEVGFAQMALDRETSIVDMVDENGNIWNCTLSFSMNPAPNFKIGGGWE
LMVKARKFAEGVRVVVGAPAVGMNLTLYFCVIRR
Download sequence
Identical sequences A0A072W0Z9
Medtr1g105780.1 XP_013469922.1.50012

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