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Domain assignment for Medtr4g124900.1 from Medicago truncatula

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Medtr4g124900.1
Domain Number 1 Region: 116-255
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.1e-44
Family B3 DNA binding domain 0.0042
Further Details:      
 
Domain Number 2 Region: 997-1071
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.0000000128
Family PB1 domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Medtr4g124900.1
Sequence length 1120
Comment | auxin response factor 2 | HC | chr4:51795315-51802487 | 20130731
Sequence
MKAPNNGYMPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ
TDFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKDAILASDFGLKQNR
QPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAFRH
IYRGQPKRHLLTTGWSVFISTKRLFAGDSVLFIRDEKQQLLLGLRRANRQQPALSSSVIS
SDSMHIGILAAAAHAAANNSPFTIYYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMF
ETEESGVRRYMGTVTGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTP
FYICPPPFFRQNFPGHPGMPDDGSDVENSFKRAMPWLGDDFGMKDASSSVFPGLSLVQWM
SMQQKNQFSGAQSGCFPSMLSSNTLHSNLSTDDPSKLLSFQAPALSAPNLQFNKPNLPNQ
INQLQQSPTSWPQQQQQQQQPLQQQQQQQQQQQQQLQSLSQIPMNQFQQQRQQQLPESQN
LTLLQQQITHQLQKQPQSSQHAIMNNGVVASNQITNQFQQPQPLAYAQLQQQQQLLQGSI
PLQQSIQSASKNAFPLTSLPHDSQFHQQIDQQASLSQRQQQQTQSQQSSLQALQQSQPQR
VQPNLQATQMSQQNTSEQQLQLQFLQKLQQQQQQQQLLSTSNPLLQSQLLQQQNTNQQNQ
QLSQLPISQHHNQQFGNNAFSTEKLLNSNNLSSSSLMQSQQLSVNQTRNTQKPLTITRVP
STLTDGEAPSCSTSPSTNNCRITQPNLLKRNQQVPTTIGGILAVEPTSNLIHDLQSKSDM
HIKHEFSNVKGSDQLKYKGTTTDQLEASSGTSYCLDPGNVQQNLPLSNFCMEGDVQSNPR
INLPFDSNLDGLMSDTMLSRGFDSQKDLQNLLSNYDAAPRDIETELSTADISSQSFGLPD
MSFKPGCSNDVGINDTSGVLNNGLRANQNQRMRTYTKVQKRGSVGRCIDVTRYKGYDELR
YDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQ
MSLDGDLGNVTIPNQASSGTDSGNAWRGQYDDNSAASFNR
Download sequence
Identical sequences G7JS69
Medtr4g124900.1 XP_003609970.1.50012

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