SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_001086541.1.7800 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_001086541.1.7800
Domain Number 1 Region: 1123-1318
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 3.14e-56
Family BCR-homology GTPase activation domain (BH-domain) 0.00002
Further Details:      
 
Domain Number 2 Region: 909-1032
Classification Level Classification E-value
Superfamily PH domain-like 5.9e-29
Family Pleckstrin-homology domain (PH domain) 0.0000105
Further Details:      
 
Domain Number 3 Region: 37-64,92-164
Classification Level Classification E-value
Superfamily PDZ domain-like 2.89e-19
Family PDZ domain 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001086541.1.7800
Sequence length 1926
Comment rho GTPase-activating protein 21-A [Xenopus laevis]; AA=GCF_001663975.1; RF=representative genome; TAX=8355; STAX=8355; NAME=Xenopus laevis; strain=J; AL=Chromosome; RT=Major
Sequence
MATRRAIVPEQQQEPSSPASEISKNKDGQEQSEMVSPMEEEGFCWPGPKSVALRRTSDGF
GFTLRHFIVYPPESAVHTSIKDEENGNRGVNTGRPRNKLEPMDTIFVKQVKEGGPAHEAG
LCTGDRIIKVNGESVIGKTYSQVIALIQNSDSTLELSVMPKDEDILQLAYSQDAYLKGND
SYSGNAHHIPEPPPLCYPRIKPAASVMAQPVEVPPSGTSLAKQQSSRPVRTATTQPDRSY
RVEIQVPPSPTELVKSNTAVCVCNEAVRTVLVPSEKVVDLSSNRTNRAGPLHRTEEVRYG
LADPSILKRTTSPTSSIPHVQMVPTARQFDNAGVIGKPPSYGGHAENMFSTRPTAQAEGS
PSPTNHYSSPGPHQQIDWRNYKTYKEYIDNRRMQMYGCRTIQERLDSLKAASQTTTDYNQ
MLPNHFSGQSRRRSTSHDRVQQSVQMRQRSVSQERLEDPVLMKEWPRSASQDTLSSAVAS
RNHRSESWDYHARKGDFDQFIVETQSNGERKHNYKWSGFTEQDDRRGITERPRQHSFHMS
LRSPNFTMAPVPYTSFAHPLQKVHPDVKTIQPTRQNSYRSPHPRPAVSDRSGFAVSKSNS
VKIPTPCASKSYSPSVRSDDGIVIDQKPVNYMHVSGPQNFQRKTQTESASGFQLDSVKTS
MSASSSPPANTKPAKQVKHSTATSQNVDVKKTPSPEANAGDSDAVLTPVDQVVLREKPSP
GQQTSPPIRQQSYIFAVNEQEGVSDTTCWLPNDARREVHIKRIEQRKASGSNSPGNSLAS
IPFIDEPTSPSIDHEIGNIPASAVISISEQPLPTITTVPPSPTSPVPLMRRHFSHDHDSI
RPSILEVNSKTERSKSCDEGLDDYKEEGKLGLKQGSSLKGVQARENVPSSEDSESRKDSS
SDVFSDSNKEGFLYFRQVTTEKGKRVSGSIRPWKQMYVVLRGSALYLQKDKKEQTGHSSA
QSDEEQLIGINGCLIDISYSETKRKHVFRLTTSDREFLFQAEDRDDMLAWIKAIQENGNL
NDEQTDQASRVLISKRIKEYNTMMSSASNKSEQSPKAPRQTLSIRQPFRATRPDGKLQSP
HSPKQESERRLFSKDDISPPKDKGSWRRIMKNPFEKKPITGGTFGVRLDDCPPAHNNKYV
PLIVDVCCKLVEERGLEATGIYRVPGNNAAISSMQEDLNKANTDIDIQDDKWRDLNVISS
LLKSFFRKLPDPLFTNEKYNDFIEANRTEDPVERLKTLKRLILDLPDHHYETLKYLSAHL
KTVADNAELNKMEPRNLAIVFGPTLVRTSEDNMTHMVTHMPDQYKIVETLIQKHDWFFSD
ESADEPITTVHEESTVESQPVPNIDHLLPNIGRTGLSPGDVSDSATSDSAKPKGSWGSGK
DQYSRELLVSSLFAAASRKRKKPKDKPQPSSSEDELDNVFYQKELSQVEFQIPDKQNVDK
DADLKAKANALSFKDADNIKGTNIITEDKLESDIMHSESTSPCLPKLLEPPKENHRLQVP
SDDKTIPQISFQMEESMSDSGTMLSNSSQASAQRSKPKVVSPEFKGHDFLTADVSSITSD
YSTTSSTIYMTGLDPNPISPEVQSVAESKGEEADDERSELISEGRPVETDSENDFHIFAS
SLAFNRQHRSKEEDPPRNVQANAEGSPSCTEGSITPRLDTRRFSSHKLIECDTLSRKKSV
RLKTDSECSAESKNEETLSDAHEVMKKSRSPINVDTTANNEPEEPAWRIKITDRLKLRLK
ASADDMFGIGSQKAHAAETRKKKNIRRRHTLGGQRDFAEISVLNAWKINEPSSKEVELSA
VDRLKPKCPSQDLSISDWLARERLRTSTSELSTVEPEEKHISETTGQKESVSPSPPPSSS
PSQVSTADIPTGSESPSLGTAPQSDDQMNGDSFQSKNKNNFSPAVDAHPHKLSGTQVVRS
RFYQYL
Download sequence
Identical sequences Q6DFG0
gi|147907020|ref|NP_001086541| gi|49903388|gb|AAH76778| gi|82182877|sp|Q6DFG0| NP_001086541.1.7800

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]