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Domain assignment for NP_001094047.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001094047.1.4139
Domain Number 1 Region: 171-270
Classification Level Classification E-value
Superfamily Ubiquitin-like 1.55e-33
Family Ras-binding domain, RBD 0.0024
Further Details:      
 
Domain Number 2 Region: 312-426
Classification Level Classification E-value
Superfamily PH domain-like 6.3e-16
Family Pleckstrin-homology domain (PH domain) 0.013
Further Details:      
 
Weak hits

Sequence:  NP_001094047.1.4139
Domain Number - Region: 141-150
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.00497
Family Formin homology 2 domain (FH2 domain) 0.13
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001094047.1.4139
Sequence length 664
Comment amyloid beta A4 precursor protein-binding family B member 1-interacting protein [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MGESNEDIDQMFSTLLGEMDLLTQSLGVDTLPPAEPKPPREEFNFSVGFKDLNESLNALE
DQDLDALMADLVADISEAEQRTIQAQKESSQNQGHSALLEASDGQGTAPRGYGANAAAFD
VSDYEEALPPPPADPMLDLLPPPPPPPPKPLSKEEEEALAKADKIKLALEKLKEAKVKKL
VVKVHMGDNSTKSLMVDERQLARDVLDNLFEKTHCDCNVDWCLYEIYPELQIERIFEDHE
NVVEVLSDWTRDTENRVLFLEKEEKYAVFKNPQNFYLDNKGKKEKESNEKMNAKNKEYLL
EESFCGTSIIVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQF
ENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAKY
GKTLYDNYQRAVARAGLASRWTNLGTATTPAQPAAGLKTGTSQPNGPMPQAAPSPGPPLR
ETLTQTETTKDEKQGLANHSPGASRENHRPKSSLLPPPPPVRRSSDTCGSPALPPKAKGP
GSCTFTAQPENFLPPPPPPPPQEDDNSMLLPPPPPLAYLDEPPDFVPPPPPPATVEDSAL
PPPPPPPPCLSQEMTKSSPLPAKKLPVPPKRQENQGLPGAPRNTEQDFMSDLMKALQKKR
GNVP
Download sequence
Identical sequences D3ZDZ1
ENSRNOP00000024272 NP_001094047.1.100692 NP_001094047.1.4139

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