SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_001122007.1.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_001122007.1.45394
Domain Number 1 Region: 199-348
Classification Level Classification E-value
Superfamily PH domain-like 1.54e-32
Family Third domain of FERM 0.0015
Further Details:      
 
Domain Number 2 Region: 89-198
Classification Level Classification E-value
Superfamily Second domain of FERM 1.83e-23
Family Second domain of FERM 0.0017
Further Details:      
 
Domain Number 3 Region: 3-89
Classification Level Classification E-value
Superfamily Ubiquitin-like 9.51e-22
Family First domain of FERM 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001122007.1.45394
Sequence length 1003
Comment FERM domain-containing protein 4A [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MTEGRRCQVHLLDDRKLELLVQPKLMAKDLLDLVASHFNLKEKEYFGISYVDETGHFSWL
QLDRRVLEHEFPKKSGPVVLYFCVRFYIESISYLKDNATIELFFLNAKSCIYKELIEVDS
EVVFELASYILQEAKGDFTSNDVTRADLKKLPALPTQALKEHPSLAYCEDRVIEHYKKLS
GQSRGQAIVNYMSIVESLPTYGVHYYAVKDKQGIPWWLGLSYKGIFQYDYQDKVKPRKVF
QWRQLENLYFREKKFSVEVHDPRRASVTRRTFGHSGIAVHTWYACPTLIKSIWAMAISQH
QFYLDRKQSKSKIHAARSLNEIAIDLTETGTLKTSKLANMGSKGKIISGSSGSLLSSGSQ
ESDSSQTAKKDMLAALRARQEALEETLRQRIEELKNICIREAELTGKLPKEYPLDPGEEP
PTVRRKIGTAFKLDEQKILPKGEEEELERLEREFAIQSQITEAARRLASDPHISSKKLKK
QRKTSYLNALKKLQDIENGINEYRVRSGKKPTQRASLIIEEANIGSEDSSLSDALVLDDD
DSQVTGTPTFSPAASPHKGLPPRPPSHSRPPPPQSLDGLRHLHYQRSDYDKSPIKPRMWS
ESSLDEPYERVKKRSSHSSSHRRFPSTGSCEAGVSNSLQNSPVRSLPHWNSQSSMPSTPD
LRTRSYVHSASLTQPFRGRSSSLESQGKLLSLEPDTEAGLSPDLFLSGPQRTGSNGSVVP
DDCSSCTSHSSSEHYYPSSTSNPNYCTLAEDSPSKARQRQRQRHKSAGHLGASSSGSMPN
LAARNGSTHGGVCGSHQGVYLHSQSQPSSQYRIKEYPLYTEGSSPNAVVVRSLENDQEGH
YSVKAQFKTSNSYTAGGLYKEGWGSGEDGEAGGGGGSGRLTPSRSQIVRTPSLGREGGGG
GGRAAVSEELRCWYQRSSGSIKEHSRVTHTSSNSSDGRGGRIGTLVKGSPAASPHSQRSG
TPCSDPAATPPCSPQHILNWQSGDTTESSPTEDRSPSHQSTDQ
Download sequence
Identical sequences A2CGB3
ENSDARP00000118708 NP_001122007.1.45394 7955.ENSDARP00000087563

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]