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Domain assignment for NP_001336124.1.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001336124.1.45394
Domain Number 1 Region: 1207-1377
Classification Level Classification E-value
Superfamily C-type lectin-like 2.23e-74
Family Endostatin 0.00000092
Further Details:      
 
Domain Number 2 Region: 65-262
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 6.18e-30
Family Laminin G-like module 0.058
Further Details:      
 
Weak hits

Sequence:  NP_001336124.1.45394
Domain Number - Region: 811-914
Classification Level Classification E-value
Superfamily C-type lectin-like 0.0254
Family Endostatin 0.044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001336124.1.45394
Sequence length 1383
Comment collagen type XVIII, alpha 1 precursor [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MMAELRFWLCLFILACVRIRHTHGWFWFDDSKEIEKGVQTPAYLTTVGPTSLPRTEPSRT
TEESGVSLLQLIGDPPPNGVSKVFDQANSPGYVFGPSSNVGQSAAAHLPNPFYRDFSLIF
NIKPTSSKPGVIFSITDPTQNIMYVGVKLSAVERGKQSIIFYYTEPDSQSSYEAARFSVS
SMLNIWTRFSISVLNEQVSLYFNCDSDPQVVNFERSPDDMDMDAGAGVFVGHASGADPDK
FLGVIGDLRVSRDPGAAERHCEEEEDDYATEASGDYGASGDGEQPSPVQPTPPSSRPIQR
PPVISRDPIQRPPVISREPIQQTVARGEKGDRGEKGAKGDRGLAGPKGDVGSGSVSGGGS
KGDKGVPGEKGMKGTSGFGYPGSKGDRGPPGPPGPPGPQGPSAEVEVRGDGSVVQKVTGP
RGPPGPQGPPGPPGPEGEPGDPGEDGKAGQVGPSGFPGNPGNPGPKGDKGDRGESQPGPR
GPPGPPGPPGPSSGFDRPTFVDMEGSGFDMDSVRAVPGLPGPPGPPGPPGPPGSASSGSG
GFGPPGPPGQNGAPGQPGLSGVPGADGKPGLPGPKGEKGDAGELGLPGPVGEKGAKGSSG
PPGTTGIGGPAGLPGPIGPIGLPGPPGPPGPSFNVGFDDMEGSGVHFSSVPGVRGPVGIP
GPPGVPGPQGQPGFPGLPGEKGSLGAQGNDGLPGADGFPGPQGPKGDKGERGDRGEPGRD
GHGHPGQPGPPGPPGQIIYRYSEHYDEVGGTGAQGGSGVPGQAGFPGPMGPKGDRGEPGL
PGYDIKGEKGEPGLILGPDGNPLYLGGLTGQKGERGISGPVGPPGPAGPPGAKGEFGMPG
RPGRPGVNGYKGEKGEPSSGSGYGYPGPPGPPGPPGPPGPAVPLDRFGRYEDYARLYPAT
KGEKGDQGAPGIPGSPGFSTNFDIYSLKNEMKGERGESGLKGEKGEPGGGFYDPRFGAVQ
GPPGNPGPAGPKGDSIRGPPGPQGPPGTPGVGYDGRPGNPGPPGPPGPPGSPSLPGPYRP
PLSIPGPPGPPGPPGIPGTGSGVTVLRSHDIMIATARRQTEGTLIYILDRNDLYLRVRDG
VRQVMLGDYKPLYGELDNEVAAVQPPPVVHYSQDHTANNGAEQISPPHQPIDFPTREQEN
RNPNPQPDPRYPDPRYPPYTDNRYTDPVEPNIRYPVQPERNPITPARRPIPPVNQPGGHA
HTHTSGPGLHLIALNSPQVGNMRGIRGADFMCFQQARAVGMKGTFRAFLSSKLQDLYSIV
RRSDRETLPIVNLKDQVLFSSWESLFSDSESRMKDNAPIYSFDGRDVLRDSAWPEKMIWH
GSDGRGHRQTDNYCETWRAGDRAVTGLASSLQAGQLLQQTSSSCSSSYIVLCIENSYMTQ
SKK
Download sequence
Identical sequences B0S8G5
NP_001336124.1.45394 ENSDARP00000002450

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