SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_783554.1.92137 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_783554.1.92137
Domain Number 1 Region: 83-185
Classification Level Classification E-value
Superfamily TAFH domain-like 1.96e-39
Family TAFH domain-like 0.00000134
Further Details:      
 
Domain Number 2 Region: 475-517
Classification Level Classification E-value
Superfamily HIT/MYND zinc finger-like 0.00000000012
Family MYND zinc finger 0.00022
Further Details:      
 
Weak hits

Sequence:  NP_783554.1.92137
Domain Number - Region: 409-483
Classification Level Classification E-value
Superfamily CAPPD, an extracellular domain of amyloid beta A4 protein 0.000889
Family CAPPD, an extracellular domain of amyloid beta A4 protein 0.0096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_783554.1.92137
Sequence length 567
Comment protein CBFA2T1 isoform C [Homo sapiens]; AA=GCF_000001405.37; RF=reference genome; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Patch
Sequence
MPDSPVDVKTQSRLTPPTMPPPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNGF
SNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVN
STLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQL
LLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRYS
PNNGLSYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGTRQ
EEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRRYS
DAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNEVK
RQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWN
CGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAG
SPMDTPPAATPRSTTPGTPSTIETTPR
Download sequence
Identical sequences A0A2I3HT10 A0A2J8PLN6 A0A2J8UG39 F7GN17 W8FW32
ENSP00000353504 ENSP00000390137 gi|28329419|ref|NP_783553.1| gi|28329422|ref|NP_783554.1| ENSCJAP00000000261 ENSP00000353504 ENSP00000390137 ENSP00000428742 OPTIC7291 hsi002005805.2 NP_783553.1.87134 NP_783553.1.92137 NP_783554.1.87134 NP_783554.1.92137 XP_006716739.1.92137 XP_009453905.1.37143 XP_009453906.1.37143 XP_009453908.1.37143 XP_011515655.1.92137 XP_012351561.1.23891 XP_016815163.1.37143 XP_016869423.1.92137 XP_016869424.1.92137 XP_016869425.1.92137 XP_016869426.1.92137 XP_018888149.1.27298

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]