SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_986250.2.49492 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_986250.2.49492
Domain Number 1 Region: 6-81
Classification Level Classification E-value
Superfamily Cap-Gly domain 3.8e-22
Family Cap-Gly domain 0.0011
Further Details:      
 
Weak hits

Sequence:  NP_986250.2.49492
Domain Number - Region: 477-493
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0228
Family Retrovirus zinc finger-like domains 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_986250.2.49492
Sequence length 497
Comment AFR702Wp [Eremothecium gossypii ATCC 10895]; AA=GCF_000091025.4; RF=representative genome; TAX=284811; STAX=33169; NAME=Eremothecium gossypii ATCC 10895; strain=ATCC 10895; AL=Complete Genome; RT=Major
Sequence
MSDKYQDRIGTFLQIPNVGKGQLKYIGPVEGKQGLFVGVDLLANIGKNDGTFRGKRYFET
EYPQSGLFIHLQKVAWLLDQAGDGLPGGTTAAGHNPQVHAQAHGQAHPQQQRLSIVTSTS
TLATNGSTGAAKTRNRASSVIYRSPTPRRVVSRAASMMSRRTLASDQSDFFSDSMEAEDR
PHSENEDDVEEEEDAEDAATESADNRNSIFMTPKYFKRQSISYESKIKQQQEEILHYKRL
LDDQRIVLEEIQPAIDDYEEKLRYLEAEKQRLQNTLQSEREHLAKQKQYFEAEHEQLLSV
VDELHKEIKENEERMLRQRRRQTIIMEDEGQVLEMDTLKSENDRLKRQLEELLKQCEEQE
LLKAEWQKERARLQTDNLSLNDGYSSLSKELAETQRKLDDIVQGQSLKSGTDLASYQSEI
EYLRRELEEARSLIGVKSSVHSNRHRDELGLQSKLPNESLPLFDGNKNKDAAAGRLLWCA
LCEKDGHTAFECTEVAF
Download sequence
Identical sequences Q751X3
NP_986250.2.49492

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]