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Domain assignment for WP_000012961.1.39636 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_000012961.1.39636
Domain Number 1 Region: 3-314
Classification Level Classification E-value
Superfamily Cloacin translocation domain 1.27e-80
Family Cloacin translocation domain 0.00000000092
Further Details:      
 
Domain Number 2 Region: 316-454
Classification Level Classification E-value
Superfamily Colicin E3 receptor domain 1.7e-62
Family Colicin E3 receptor domain 0.000000428
Further Details:      
 
Domain Number 3 Region: 449-578
Classification Level Classification E-value
Superfamily His-Me finger endonucleases 1.18e-52
Family HNH-motif 0.000000582
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_000012961.1.39636
Sequence length 581
Comment MULTISPECIES: colicin [Enterobacteriaceae]; AA=GCF_000936635.1; RF=na; TAX=562; STAX=562; NAME=Escherichia coli; AL=Scaffold; RT=Major
Sequence
MSGGDGRGHNTGAHSTSGNINGGPTGLGVGGGASDGSGWSSENNPWGGGSGSGIHWGGGS
GHGNGGGNGNSGGGSGTGGNLSAVAAPVAFGFPALSTPGAGGLAVSISAGALSAAIADIM
AALKGPFKFGLWGVALYGVLPSQIAKDDPNMMSKIVTSLPADDITESPVSSLPLDKATVN
VNVRVVDDVKDERQNISVVSGVPMSVPVVDAKPTERPGVFTASIPGAPVLNISVNNSTPA
VQTLSPGVTNNTDKDVRPAGFTQGGNTRDAVIRFPKDSGHNAVYVSVSDVLSPDQVKQRQ
DEENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDA
ANKTLADAIAEIKQFERFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKAD
ADAALSAAQERRKQKENKEKDAKDKLDKESKRNKPGKATGKGKPVGDKWLDDAGKDSGAP
IPDRIADKLRDKEFKNFDDFRKKFWEEVSKDPDLSKQFKGSNKTNIQKGKAPFARKKDQV
GGRERFELHHDKPISQDGGVYDMNNIRVTTPKRHIDIHRGK
Download sequence
Identical sequences WP_000012961.1.12762 WP_000012961.1.21104 WP_000012961.1.21519 WP_000012961.1.26716 WP_000012961.1.2823 WP_000012961.1.29055 WP_000012961.1.29724 WP_000012961.1.33729 WP_000012961.1.39636 WP_000012961.1.42300 WP_000012961.1.44445 WP_000012961.1.48000 WP_000012961.1.51127 WP_000012961.1.51260 WP_000012961.1.51580 WP_000012961.1.51999 WP_000012961.1.60186 WP_000012961.1.67102 WP_000012961.1.71042 WP_000012961.1.71134 WP_000012961.1.72120 WP_000012961.1.73827 WP_000012961.1.74431 WP_000012961.1.76544 WP_000012961.1.80753 WP_000012961.1.81034 WP_000012961.1.85435 WP_000012961.1.85762 WP_000012961.1.86640 WP_000012961.1.92780 WP_000012961.1.94507 WP_000012961.1.96229

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