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Domain assignment for WP_000015682.1.80496 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_000015682.1.80496
Domain Number 1 Region: 179-394
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 3.06e-74
Family Type II restriction endonuclease catalytic domain 0.0000000548
Further Details:      
 
Domain Number 2 Region: 3-172
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.26e-56
Family Type II restriction endonuclease effector domain 0.000000556
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_000015682.1.80496
Sequence length 402
Comment restriction endonuclease [Salmonella enterica]; AA=GCF_001245545.1; RF=na; TAX=340190; STAX=28901; NAME=Salmonella enterica subsp. enterica serovar Schwarzengrund; strain=CVM N50434; AL=Contig; RT=Major
Sequence
MSGLHSWLLDKSTSDTYMFIKRLSANDTGATGGHQVGIYIPSGIVEHLFPSINHTRDLNP
SVTLNAHTSSHSCPDSEARAVYYNGRFFGKTRNEKRITRWGGGKNPLQISENTGALALLA
FDHRQGADSQCVDIWVCHDAEEEDIVESSLGEIVPGSLVYGPANEILGGLALKEPVSSGY
CLPEEWRTNFPSGKEIIQYAAAHYSPNVVGPDKQLIERRRVEYEIFLLVEEMHVLGIVQS
GFGSVNEFIALANSVSNRRKSRAGKSLELHLEQLFNEYGLKTFETQAVTEGNKKPDFLFP
SAQAYHDEAFPEQKLRMLAVKTTCKDRWRQILNEADRIQDIYLFTLQEGVSVAQFQEMQQ
ERVRLVVPSSLHDKYPKAIREYLISLETFIDETKSLYADEII
Download sequence
Identical sequences A0A0N1QW73 A0A271CI72 A0A2A6DCW4 A0A2I6MD37
439843.SeSA_A4748 ABEJ01000001|CDS_85244-84036 CP001127|CDS_4616076-4614868 gi|194735875|ref|YP_002117412.1| WP_000015682.1.101147 WP_000015682.1.10164 WP_000015682.1.10293 WP_000015682.1.13528 WP_000015682.1.13799 WP_000015682.1.13827 WP_000015682.1.14296 WP_000015682.1.15054 WP_000015682.1.16804 WP_000015682.1.17270 WP_000015682.1.18277 WP_000015682.1.18365 WP_000015682.1.19174 WP_000015682.1.19405 WP_000015682.1.20810 WP_000015682.1.21473 WP_000015682.1.22069 WP_000015682.1.22966 WP_000015682.1.23053 WP_000015682.1.24412 WP_000015682.1.24521 WP_000015682.1.25397 WP_000015682.1.26833 WP_000015682.1.27655 WP_000015682.1.2806 WP_000015682.1.28174 WP_000015682.1.28963 WP_000015682.1.30225 WP_000015682.1.3066 WP_000015682.1.3185 WP_000015682.1.3304 WP_000015682.1.34022 WP_000015682.1.37100 WP_000015682.1.37808 WP_000015682.1.40693 WP_000015682.1.42356 WP_000015682.1.43654 WP_000015682.1.44339 WP_000015682.1.45154 WP_000015682.1.49090 WP_000015682.1.52456 WP_000015682.1.56413 WP_000015682.1.56642 WP_000015682.1.57495 WP_000015682.1.57857 WP_000015682.1.58251 WP_000015682.1.59755 WP_000015682.1.62108 WP_000015682.1.63782 WP_000015682.1.67175 WP_000015682.1.70183 WP_000015682.1.70281 WP_000015682.1.70355 WP_000015682.1.7044 WP_000015682.1.7093 WP_000015682.1.70986 WP_000015682.1.71450 WP_000015682.1.71583 WP_000015682.1.74469 WP_000015682.1.74876 WP_000015682.1.75168 WP_000015682.1.7531 WP_000015682.1.76611 WP_000015682.1.78789 WP_000015682.1.8024 WP_000015682.1.80496 WP_000015682.1.81118 WP_000015682.1.84115 WP_000015682.1.84403 WP_000015682.1.85797 WP_000015682.1.86092 WP_000015682.1.86658 WP_000015682.1.90521 WP_000015682.1.90991 WP_000015682.1.92836 WP_000015682.1.92843 WP_000015682.1.94986 WP_000015682.1.96404 WP_000015682.1.97005 WP_000015682.1.97496

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