SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_000447001.1.74549 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_000447001.1.74549
Domain Number 1 Region: 246-521
Classification Level Classification E-value
Superfamily Colicin 1.57e-92
Family Colicin 0.0000302
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_000447001.1.74549
Sequence length 521
Comment colicin 10 [Escherichia coli]; AA=GCF_001892405.1; RF=na; TAX=562; STAX=562; NAME=Escherichia coli; strain=461; AL=Scaffold; RT=Major
Sequence
METAVAYYKDGVPYDDKGQVIITLLNGNPDGSGSGGGGGTGGSKSESSAAIHATAKWSTA
QLKKTQAEQAARAKAAAEAQAKAKANRDALTQHLKDIVNEALRHNSTHPEVIDLAHANNA
AMQAEAERLRLAKAEEKARKEAEAAEKAFQEAEQRRKEIEKEQAETERQLKLAEAEEKRL
AALNEEARAVEVAQKNLAAAQSELAKVDEEIKTLNTRLSSSIHARDAEMNTLSGKRNELA
QASAKYKELDELVKKLSPRANDPLQSRPFFYATSRRTGAGKIMEEKQKQVTASETRINQL
NAEINGIQGAMSQANNNRNTAVLRVHESEENLKTAQTNLLNSQIKDAVDATVSFYQTLSE
KYGEKYSKMAQELADKSKGKKISNVNEALAAFEKYKDVLNKKFSKADRDAIFNALESVKY
EDWAKHLDQFAKYLKITGHVSFGYDVVSDILKIKDTGDWKPLFLTLEKKTVDAGVSYIVV
LLFSVLAGTTLGIWGIAIVTGILCAFIDKNKLNTINDVLGI
Download sequence
Identical sequences A0A1M0MF60 B1LRZ3
gi|170650746|ref|YP_001739880.1|NC_010485 WP_000447001.1.21017 WP_000447001.1.24483 WP_000447001.1.24592 WP_000447001.1.28145 WP_000447001.1.37516 WP_000447001.1.38185 WP_000447001.1.40190 WP_000447001.1.44784 WP_000447001.1.51548 WP_000447001.1.51690 WP_000447001.1.53972 WP_000447001.1.55563 WP_000447001.1.57982 WP_000447001.1.58232 WP_000447001.1.74549 WP_000447001.1.74687 WP_000447001.1.76948 WP_000447001.1.78583 WP_000447001.1.8183 WP_000447001.1.86227 WP_000447001.1.93326 WP_000447001.1.96279 439855.EcSMS35_B0007 gi|170650746|ref|YP_001739880.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]