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Domain assignment for WP_001347430.1.23105 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_001347430.1.23105
Domain Number 1 Region: 3-314
Classification Level Classification E-value
Superfamily Cloacin translocation domain 1.27e-80
Family Cloacin translocation domain 0.00000000092
Further Details:      
 
Domain Number 2 Region: 316-454
Classification Level Classification E-value
Superfamily Colicin E3 receptor domain 3.53e-63
Family Colicin E3 receptor domain 0.000000406
Further Details:      
 
Domain Number 3 Region: 449-578
Classification Level Classification E-value
Superfamily His-Me finger endonucleases 1.18e-52
Family HNH-motif 0.000000582
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_001347430.1.23105
Sequence length 581
Comment MULTISPECIES: colicin [Enterobacteriaceae]; AA=GCF_000179135.1; RF=na; TAX=679205; STAX=562; NAME=Escherichia coli MS 124-1; strain=MS 124-1; AL=Contig; RT=Major
Sequence
MSGGDGRGHNTGAHSTSGNINGGPTGLGVGGGASDGSGWSSENNPWGGGSGSGIHWGGGS
GHGNGGGNGNSGGGSGTGGNLSAVAAPVAFGFPALSTPGAGGLAVSISAGALSAAIADIM
AALKGPFKFGLWGVALYGVLPSQIAKDDPNMMSKIVTSLPADDITESPVSSLPLDKATVN
VNVRVVDDVKDERQNISVVSGVPMSVPVVDAKPTERPGVFTASIPGAPVLNISVNNSTPA
VQTLSPGVTNNTDKDVRPAGFTQGGNTRDAVIRFPKDSGHNAVYVSVSDVLSPDQVKQRQ
DEENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDA
ANKTLADAIAEIKQFDRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSD
ADAALSAAQERRKQKENKEKDAKDKLDKESKRNKPGKATGKGKPVGDKWLDDAGKDSGAP
IPDRIADKLRDKEFKNFDDFRKKFWEEVSKDPDLSKQFKGSNKTNIQKGKAPFARKKDQV
GGRERFELHHDKPISQDGGVYDMNNIRVTTPKRHIDIHRGK
Download sequence
Identical sequences E1JFJ2 E6BTB4 Q06B27
gi|190410162|ref|YP_001966152.1|NC_010883 WP_001347430.1.101937 WP_001347430.1.20831 WP_001347430.1.22809 WP_001347430.1.23105 WP_001347430.1.25346 WP_001347430.1.34983 WP_001347430.1.36281 WP_001347430.1.36971 WP_001347430.1.38264 WP_001347430.1.40238 WP_001347430.1.42369 WP_001347430.1.53308 WP_001347430.1.56388 WP_001347430.1.60559 WP_001347430.1.60816 WP_001347430.1.62348 WP_001347430.1.7637 WP_001347430.1.7808 WP_001347430.1.97802

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