SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_002371278.1.62626 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  WP_002371278.1.62626
Domain Number - Region: 22-127
Classification Level Classification E-value
Superfamily BEACH domain 0.00824
Family BEACH domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_002371278.1.62626
Sequence length 660
Comment MULTISPECIES: bacteriocin-associated integral membrane protein [Enterococcus]; AA=GCF_001835985.1; RF=na; TAX=1715144; STAX=1715144; NAME=Enterococcus sp. HMSC035B04; strain=HMSC035B04; AL=Scaffold; RT=Major
Sequence
MSGFALVSINKQVLYRTNEFFHQTDTYTPIRLPQHFIGQEEYEQLIMVFENVSSETELSY
MKKTVNESNEVDTSWNFKIQPKLEMTLYYQGDVKSSHEKVPYSNTSFRVTSIEESIKIKD
FEGEFFLMTREKEAYERVISLFTDRFNQAFHTDYATNIFEDFENSYSYSVISNTDVYNYR
VYLTIGLILLFLLLSSFFLLMNKEISLLLNNDFSLHQVLWCLLGKKKIIITFIIAGIIGG
FIFMYYKEQFLYLFQMYVFLFSGIYGISLISLLLVEKIASLREAFNYIQYILFTFGLLFS
LLLTVANVELATIVFSSSQLAVSHEPPKEIAGEDYHVFYPVTIGKNHVDFIYSNRFASAA
DQELYETLNKNGSILVNVSDYLNEENEQFGRGIKINLNYLKKFPLIDVSGRLIQITEKET
HPVILIPERYRHTDLKNDLAQITEYYQEISEKEPKFLFIKNNQPIYTFIPSIPWIEHYPV
VEILTLKNSMYLERNILSGEIYPPLKIKIGSLSKERLFELIEESQLRDNLQLSFPYTQTE
EIAVKVLSRSFHYLIQIFLLTFFSFFLLSYVMLCIYFVYNCRKIAIFRSSGYSLFETYKD
FFMMNLIKWGTTSVIFLFLIEREPKYLFNIFFFSFIDFILSVVFILSTEKKSQLLLMNGG
Download sequence
Identical sequences WP_002371278.1.62626 WP_002371278.1.71049

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]